Pseudomonas sp. UW4, PputUW4_03562 (ccoN2)
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas sp. UW4 chromosome, complete genome. [Details] | |
| DNA Sequence Upstream of Gene |
GAAGACAACCGCGAATAAATCCCGACGGCTCTGCTGCCGCATTCTCCCGGATGCGGCAGTCCCCTGCCCCTTTGCGACGCATTGTCGCACCCTCTCTGAC TCTTCCTTTCGGTTCCCCGGATTCAGGTCTAAGCTTCCCCCGATGCGGACTGGCCGGTGCCGGTTCCAGGTCGACCCTGAACGATGTGTTCGACGAATCT GCCCGATGACAGGCCGCAAAGGCTGGTAGATACCGGCTGTCGCGCCAATCTCCTTCGGTCAGCCAAACGTTGCGTTTGAACACACCCCGTTACATCCGAC CTGACCCCCTCGCCTGATCATTCCGCCGGGACGTTTTGCCCGCGGGCAATTTTGTCCCTACGCGGCGCATGGAAAGGCCGCAGAATCAGCATTTGAAAGC ATTGACCCAGGTCATGGCGCGTTGCAATGACCCCCTGCTTTCTCCATACTTGCGGCCGATTTTTAATCCTAATAAAACACCCAAACCGTGGAACCTTAGA
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| DNA Sequence for Gene |
>PputUW4_03562
|ccoN2
ATGAGCACAGCAATCAGTCCGACTGCTTATAACTATAAGGTAGTCCGCCAGTTCGCCATCATGACGGTGGTCTGGGGGATCCTTGGCATGGGGCTCGGTG TCTTCATCGCCTCGCAACTGGTCTGGCCGGAGTTGAACTTCGGTCTGGCATGGACGAGCTTTGGACGCCTGCGCCCGCTGCACACCAACCTGGTGATTTT CGCCTTCGGTGGATGTGCACTGTTTGCCACTTCTTATTACGTCGTGCAGCGAACCTGCCAAACGCGACTGATTTCCGACAGCCTCGCCGCCTTCACCTTC TGGGGATGGCAAGCGGTGATCGTCGGCGCGATCATTACCTTGCCGATGGGTTTCACCACCACCAAGGAATACGCGGAACTGGAATGGCCCCTGGCTATTC TGCTGGCCATTGTCTGGGTCACCTACGGTCTGGTGTTCTTCGGCACCATCGTCAAGCGCAAGACCAAGCACATCTATGTGGGTAACTGGTTCTACGGCGC CTTCATCGTCGTGACCGCGATGCTGCACATCGTCAACCATATGTCGCTGCCGGTCAGCCTGTTCAAGTCCTACTCGGCCTACTCGGGTGCGACGGACGCA ATGATCCAGTGGTGGTACGGCCACAACGCCGTGGGCTTCTTCCTGACCACCGGCTTCCTGGGCATGATGTACTACTTCGTGCCGAAACAGGCCGAGCGTC CGATCTACTCCTATCGCCTGTCGATCGTGCACTTCTGGGCGCTGATCACCCTGTACATCTGGGCCGGTCCCCACCACCTGCACTACACCGCACTGCCGGA CTGGGCGCAGTCGCTGGGCATGGCAATGTCGATCATCCTGCTGGCACCAAGCTGGGGCGGCATGATCAACGGCATGATGACCCTGTCGGGCGCCTGGCAT AAGCTGCGCACCGACCCGATCCTGCGTTTCCTGGTGGTGTCGCTGGCGTTCTACGGCATGTCGACCTTCGAAGGCCCGATGATGGCCATCAAGACCGTCA ACTCGCTGTCCCACTACACCGACTGGACCATCGGCCACGTACACGCCGGCGCCTTGGGCTGGGTAGCGATGATCTCGATCGGCGCCATCTACCACATGAT CCCGAAACTGTTCGGTCGTGCGCAGATGCACAGCACCGGCCTGATCAACACGCACTTCTGGCTCGCGACCATCGGTACCGTGCTCTACATCGCTTCGATG TGGGTCAACGGCATCACCCAGGGCCTGATGTGGCGTGCAATCAACGACGACGGCACCCTCACCTACTCGTTCGTCGAAGCGCTGCAAGCCAGCCACCCGG GTTTCATCGTTCGCGCCCTGGGCGGTGCGTTCTTCGCCACCGGCATGCTGTTCATGGCCTACAACGTATTCCGTACCGTACGCGCCTCGAACCCGGCTGA AGCCAAAGCCGCCGAACAGATTGCCGTAGTTGGAGCTCACTGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
TGAAGCATGAAGCAGTCGAGAAGAACATTGGCCTGCTGGCCTTCTTCATGGTCATCGCCGTCAGCGTCGGCGGCCTGACCCAGATCGTTCCGCTGTTTTT CCAGGACGTCACCAACAAGCCGGTCGAGGGCATGAAGCCCCGTACCGCCCTTGAACTGGAAGGCCGGGACGTTTATATCGCCAACGGTTGTGTCGGCTGC CACTCGCAGATGATCCGTCCGTTCCGTGCTGAAACCGAACGTTATGGCCACTACTCGGTCGCCGGTGAAAGCGTCTGGGACCACCCGTTCCTGTGGGGTT CCAAGCGTACCGGTCCGGACCTGGCCCGTGTCGGCGGTCGTTACTCCGATGACTGGCAGCGTGCGCACTTGTACAACCCGCGCAACGTCGTGCCCGAATC GAAAATGCCGGCCTACCCGTTCCTCGTGGAAAACAAGCTCGACGGCAAAGACACCGCCAAGAAAATGGAAGTGTTGCGCACGCTCGGCGTCCCTTACACC
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| Amino Acid Sequence |
>cytochrome c oxidase cbb3-type, subunit I
MSTAISPTAYNYKVVRQFAIMTVVWGILGMGLGVFIASQLVWPELNFGLAWTSFGRLRPLHTNLVIFAFGGCALFATSYYVVQRTCQTRLISDSLAAFTF WGWQAVIVGAIITLPMGFTTTKEYAELEWPLAILLAIVWVTYGLVFFGTIVKRKTKHIYVGNWFYGAFIVVTAMLHIVNHMSLPVSLFKSYSAYSGATDA MIQWWYGHNAVGFFLTTGFLGMMYYFVPKQAERPIYSYRLSIVHFWALITLYIWAGPHHLHYTALPDWAQSLGMAMSIILLAPSWGGMINGMMTLSGAWH KLRTDPILRFLVVSLAFYGMSTFEGPMMAIKTVNSLSHYTDWTIGHVHAGALGWVAMISIGAIYHMIPKLFGRAQMHSTGLINTHFWLATIGTVLYIASM WVNGITQGLMWRAINDDGTLTYSFVEALQASHPGFIVRALGGAFFATGMLFMAYNVFRTVRASNPAEAKAAEQIAVVGAH
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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