Pseudomonas sp. UW4, PputUW4_02943
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas sp. UW4 chromosome, complete genome. [Details] | |
| DNA Sequence Upstream of Gene |
TTCGAGCAGATGCGCGATTACCTGAGCTGGCTCGATCAGCTCATGCGCGACGGCGCGGCCAATGGCAGTGATATGGCCGAGATGCTGCGCAGCCCCATCC CCGAACGCTTCGCCGGGATCAGCCTGAGCCGTTATGAACTGATCCGCAGCGTCAGTCATCTGTACCCGCGCTACGAGCGCGAGCGGATGATGCGGGTGGA TTCTGCCAGCAAATAGGCGACCACAGATCCCCTGTAGGAGCGAGCCTGCTCGCGATGGACGTTAACGATAACGCTGGCAGCCTGACACCCTGCGGTGTCC TTGAGTCCATCGCGAGCAAGCTCGCTCCTACAGGGGGCCGGTGCTGTTAAAAAAATCTCGTGTCCATCTCCTCCCACCCTGTACCAAGGAACTAGCAATC TCCTCATTGCGGGCAATTGTTGTCAGGGCGGCGGCGCCCAAGAATCTGCACCAGACCGGAAAATTTCCGGACATAACAAAAATCCGCAGAGGAAGCCGTC
|
|
| DNA Sequence for Gene |
>PputUW4_02943
ATGACTCAACCCGCACGTCGCCAGCCCTTCGTCCTGAGCTTGCTGCTCAGTGCCATGCTGTTGTCCGGCCAGGCATTGGCCGGGGTTTCCGACCAGGACA TTCTCCAGGACCCGAAGAACCCGGAACAGGTGGTGACCAACGGCCTCGGCGTTCAAGGGCAGCGCTACAGCCCGCTGGATATTCTCAACGTCGACAACGT CAAGGAGCTGCGCCCGGCCTGGGCGTTTTCCTTCGGCGGTGAAAAACAGCGTGGCCAGCAAGCGCAGCCGATGGTCAAGGACGGCGTGATGTACATGACC GGTTCCTACTCCCGGGTCTTCGCCGTGGATGCGCGCACCGGCAAGAAACTCTGGCAATACGATGCGCGCCTGCCCGATGACATCCGCCCTTGCTGCGACG TGATCAACCGTGGCGTCGCGCTGTATGGCGACCTGGTGATCTTCGGCACCCTCGACGCCAAGCTCGTGGCGCTGAACAAGGACACCGGCAAGGTGGTGTG GAGCAAGAAAGTCGCCGACCACAAGGAAGGCTACTCGATCAGCGCCGCGCCGCTGGTGATCAACGGCAAGCTGATTACCGGCGTGGCCGGTGGCGAGTTC GGCGTGGTGGGCAAGATCGAGGCCTACGATCCGAAAAACGGTGATCTGCTGTGGACCCGGCCGACGGTCGAAGGCCATATGGGCTACGTCTACAAGGACG GCAAAGCCGTGGAGAACGGCATCTCCGGCGGCGAGGCGGGCAAGACCTGGCCGGGCGATCTGTGGAAAACCGGCGGTGCGGCCCCTTGGCTTGGCGGTTA TTACGATCCGGAAACCAACCTGCTGCTGTTCGGTACCGGCAACCCGGCGCCGTGGAACTCGCACCTGCGCCCTGGCGACAACCTCTACTCCTCATCGCGC CTGGCGCTCAACCCGGACGACGGCACCATCAAGTGGCACTTCCAGAGCACGCCCCACGACGGTTGGGACTACGACGGCGTGAACGAGCTGGTGTCGTTCA ACTACAGCGAAGGCGGCAAGGAGATCAAGGCGGCGGCCACGGCCGACCGTAACGGTTTTTTCTACGTGCTGGATCGTACCAACGGCAAATTCATCCGTGG CTTCCCGTTCGTGGACAAGATCACCTGGGCCACCGGCCTGGATAAGGACGGCCGGCCGATCTACAACGAAGCCAGCCGTCCCGGCGCCCCGGGTTCGGAA GTCAAGGGCAGCTCGGTTTTCGTAGCGCCGGCGTTCCTCGGTGCGAAAAACTGGATGCCGATGGCCTACAACCGGGACACCGGGTTGTTCTATGTGCCAT CCAACGAATGGGGCATGGACATCTGGAACGAAGGCATTGCCTACAAGAAAGGCGCGGCGTTCCTCGGCGCCGGCTTCACCATCAAGCCGTTGAACGAAGA CTACATCGGCGTGCTGCGGGCCATCGATCCGAAAACCGGCAAGGAAGTCTGGCGTCACAAGAATTACGCGCCGCTGTGGGGCGGGGTGCTGACCACCAGG GGCAACCTGGTGTTCACCGGCACGCCTGAAGGTTTCCTGCAGGCGTTCAACGCCAAGACCGGCGAAAAGGTCTGGGAATTCCAGACCGGCTCCGGCGTGC TCGGCTCGCCCATCACCTGGGAAATGGACGGCGAACAGTACGTCTCGGTGCTCTCCGGCTGGGGCGGCGCGGTACCGCTGTGGGGTGGTGAAGTGGCCAA GCGGGTGAAGGACTTCAACCAGGGCGGCATGCTCTGGACGTTCAAGCTGCCCAAGGACCTTGTGGCCAAGCACTGA
BLASTN Search
|
DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
|
|
| DNA Sequence Downstream of Gene |
TCCCTTGTGGGAGCGAGCTTGCTCGCGATGTTCGTCAACGATAACGCTGGAAACCTGATACCCCGCGGCGTTCTCGGGTTCATCGCGAGCAGGCTCGCTC CTACAGTGATCTGTGTGAAACCTACGACCAAATAACGAGAGCCCCTCCTGCCAACGACGCATTCGTCTGGTACGCGGGGCTCTCTAGTATCGGCTCATCG CCTGTCAGTACGACAGGCATCGACCCAGACAGAGGCCCACCATGATCTACGCACAACCCGGAACCCCAGGCGCCGTCATTACCTTCAAGCCGCGCTACGG CAACTTCATCGGTGGCGAGTTCGTTGCCCCGATCAATGGCGAGTACTTCACCAACACCTCGCCGGTCAACGGTGAAGTGATCGCCGAATTCCCGCGTTCC AGCGCCGCCGACATCGACAAGGCCCTCGACGCCGCCCATGCCGCTGCCGACGCCTGGGGCAAGACCTCGGCCCAGGACCGCTCCCTGGTGCTGCTGAAGA
|
|
| Amino Acid Sequence |
>quinoprotein ethanol dehydrogenase
MTQPARRQPFVLSLLLSAMLLSGQALAGVSDQDILQDPKNPEQVVTNGLGVQGQRYSPLDILNVDNVKELRPAWAFSFGGEKQRGQQAQPMVKDGVMYMT GSYSRVFAVDARTGKKLWQYDARLPDDIRPCCDVINRGVALYGDLVIFGTLDAKLVALNKDTGKVVWSKKVADHKEGYSISAAPLVINGKLITGVAGGEF GVVGKIEAYDPKNGDLLWTRPTVEGHMGYVYKDGKAVENGISGGEAGKTWPGDLWKTGGAAPWLGGYYDPETNLLLFGTGNPAPWNSHLRPGDNLYSSSR LALNPDDGTIKWHFQSTPHDGWDYDGVNELVSFNYSEGGKEIKAAATADRNGFFYVLDRTNGKFIRGFPFVDKITWATGLDKDGRPIYNEASRPGAPGSE VKGSSVFVAPAFLGAKNWMPMAYNRDTGLFYVPSNEWGMDIWNEGIAYKKGAAFLGAGFTIKPLNEDYIGVLRAIDPKTGKEVWRHKNYAPLWGGVLTTR GNLVFTGTPEGFLQAFNAKTGEKVWEFQTGSGVLGSPITWEMDGEQYVSVLSGWGGAVPLWGGEVAKRVKDFNQGGMLWTFKLPKDLVAKH
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
|