Pseudomonas sp. UW4, PputUW4_02897

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Sequence Data

Strain Pseudomonas sp. UW4 chromosome, complete genome. [Details]
DNA Sequence Upstream of Gene
TGCGTCCAGAACCTCTACGCCAGCCACCACCACTGGTTGCACGAGTTGCTGCGCCGACGCTTGAACAATGCGTTCGATGCCGCCGACCTGGCCCATGACA CCTTCATTCGGGTGCTCAAGCGTCCGCAGGTGTTTGACGGGGAAACCCACGAACGCTCTTATCTGGCGACCATCGCCCGAGGCCTGTGCATTGACCACTG GCGTCGTCGCCAGCTGGAACAGGCCTGGCTCGAGACCCTGGCCGCGCAGCCCCAGGCCGTCCAGCCTTCGCCGGAGCAGCGGGCGATCATCGTCGAAACC CTGTACGAAGTGGATGCCATGCTGCAGCGCTTGCCCCAGCGGGTGCGTGATGCGTTCGTTCTGGCGCAGGTGCATGGGCTGCCCTACCGAAACATTGCCG AAGAAATCGGCGTGAGCGAGCGCATGGTGAAAAAGTACCTGGCCCAGGCGCTGATGCATTGCGCAATGCTCGAAGCCGAACTCGACGGCCTGCTGATTCA
DNA Sequence for Gene
>PputUW4_02897
ATGACCCGCGCCGCCACCAACGCCATCAGCCACGCCAGCCTCGAACAGGCGGCAAGCTGGTACGTGCAACTCAACGATCACCACGCCAGCGAACAGGAAC GCGAGCATTGGCAAGCCTGGTTGGCGCAAAGCGGCGAGCATCAGGCCGCGTGGCACTATGTCGAGCGTGTGAGCCAGCGCTTTGCCGCGCTGCAGGACAC TCATCAACAAGCGGCCGGCCACGTGTTACTCAACAGCGGCCGCGCTTCCATCAGCCGCCGCCAGACGGTCAAAAGCCTGCTGGTGCTGGTGTCGGGCAGT TGGCTCGGCTGGAGCGCATGGCGGCAAAGCGCCCTGCCGCTGACCCTGACCCGATGGACCGCGGACCTCTCCACCGGCACCGGCGAAACCCGGGAAGCCC GGCTCAGCGATGGCAGCCAGATCTGGCTCAACGCCCTCAGTGCGCTGAATGTACGCTTCGACATCGCACAACGTTTACTGCTGTTGCAGGCCGGAGAGGT GTTGATCGACACCGCCAGCGACACCAGCCGCCCGCTGCTGGTGCAAACCGTCGAGGGCCGCCTGCGCGCGCTGGGTACGCGTTTCAGCGTGCGTCAGGAA GACCGGCAAACACTGTTGAATGTCTACGAAGGCGCAGTTGAAGTCCGCACCACCCAGGGTCAGATGCAGGTGGTCAAGGCCGGACAGCAGCTGTGCTTTA CACAAGACCACACACCGACACCGACCGCTGCGTCGGCCGGCCGCGAAGCCTGGCGCCGCGGCCTGTTACTGGCGGACAACCTGCCGCTGGGGCAGTTGCT CGAAGAACTGAGTCGCTATCGTCCAGGGCATCTGGGATGTGACCCGGCGGTGGCCGGGCTGCCGGTCATGGGTGCGTTCCCGCTCAAGGACACCGATCAG GCTTTGCGCCTGCTGGAAGCGGCATTGCCGGTACGGGTGCAGAAGCCGCTGGAGTGGTGGGTCAACGTAGGCCCGAAAACCTGA
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
TGAGCGTTTTTTCCGGTGCGTCGGTTCCCTTTTGCCTTTTTCGCTCGGTTAATCCTTCAAGCACTACGAATGCAGATTGATCCGACTTCCGGGAACTCCA TGCCGCGCGCCACCCTTACTCGCCAGCGCTTCGCCTTGCATCCGCTGGTGCTGGCGCTGGCGGTGGTCTTGCCGGGCCTGGACGTGTCGCGCAGTCAAGC CACCCCTCTGGTCGATAGCGAACAACCCGGCAGCCAGACACGCCATTACGCAATCGCCGGCGGATCGCTGGTGAGCGTTCTCAACCGCTTTGCCGAACAG GCCGGGATCTTTCTCGCCGGACACAATGAACTCGCTGCCGGCAAACGCAGCCCTGGGCTGAACGGTGTCTACAGCCAGCAACAAGCGCTGCAACAACTGC TGCAAGGCAGCGGCCTGCAAGCGCAACGCCAGGGGAACGGCGGTTATGTGTTGCACGGCGCCACCGTGGCACAAGATGCGCTGGAACTGGGGGCGACCAA
Amino Acid Sequence
>sigma factor regulatory protein FecR/PupR family
MTRAATNAISHASLEQAASWYVQLNDHHASEQEREHWQAWLAQSGEHQAAWHYVERVSQRFAALQDTHQQAAGHVLLNSGRASISRRQTVKSLLVLVSGS WLGWSAWRQSALPLTLTRWTADLSTGTGETREARLSDGSQIWLNALSALNVRFDIAQRLLLLQAGEVLIDTASDTSRPLLVQTVEGRLRALGTRFSVRQE DRQTLLNVYEGAVEVRTTQGQMQVVKAGQQLCFTQDHTPTPTAASAGREAWRRGLLLADNLPLGQLLEELSRYRPGHLGCDPAVAGLPVMGAFPLKDTDQ ALRLLEAALPVRVQKPLEWWVNVGPKT
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site