Pseudomonas sp. UW4, PputUW4_02887

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments
Molecular Function GO:0016887 ATPase activity
ISM
Inferred from Sequence Model
Term mapped from: InterPro:SM00382
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0005524 ATP binding
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PF08352
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Biological Process GO:0015833 peptide transport
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PF08352
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0000166 nucleotide binding
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PF08352
 ECO:0000259
match to InterPro signature evidence used in automatic assertion

Functional Classifications Manually Assigned by PseudoCAP

Pathways

Database Xref Pathway Version Evidence PMID
KEGG ppuu02010 ABC transporters 81.0+/01-23, Jan 17 ECO:0000249
sequence similarity evidence used in automatic assertion

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal 237 267 3.6E-5
SMART SM00382 AAA_5 IPR003593 AAA+ ATPase domain 35 235 3.0E-16
Pfam PF00005 ABC transporter IPR003439 ABC transporter-like, ATP-binding domain 27 185 4.7E-28
Pfam PF00005 ABC transporter IPR003439 ABC transporter-like, ATP-binding domain 303 453 2.6E-30
SMART SM00382 AAA_5 IPR003593 AAA+ ATPase domain 311 501 2.2E-16
CDD cd03257 ABC_NikE_OppD_transporters - - 275 507 4.58621E-107
Gene3D G3DSA:3.40.50.300 - IPR027417 P-loop containing nucleoside triphosphate hydrolase 4 271 7.4E-83
Gene3D G3DSA:3.40.50.300 - IPR027417 P-loop containing nucleoside triphosphate hydrolase 274 535 3.9E-82
SUPERFAMILY SSF52540 P-loop containing nucleoside triphosphate hydrolases IPR027417 P-loop containing nucleoside triphosphate hydrolase 6 257 5.86E-68
SUPERFAMILY SSF52540 P-loop containing nucleoside triphosphate hydrolases IPR027417 P-loop containing nucleoside triphosphate hydrolase 275 524 2.55E-66
FunFam G3DSA:3.40.50.300:FF:000016 Oligopeptide ABC transporter ATP-binding component - - 272 536 7.3E-103
CDD cd03257 ABC_NikE_OppD_transporters - - 6 240 1.41039E-112
PANTHER PTHR43776 TRANSPORT ATP-BINDING PROTEIN - - 273 529 0.0
FunFam G3DSA:3.40.50.300:FF:000016 Oligopeptide ABC transporter ATP-binding component - - 3 271 1.3E-112
Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal 504 528 3.8E-5

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.