Pseudomonas sp. UW4, PputUW4_02753
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas sp. UW4 chromosome, complete genome. [Details] | |
| DNA Sequence Upstream of Gene |
TGAGCAAAAGGTCCAGGGCCTGCTGGCGGTGTTGCGCGATTCGATCCTGCAGCACCGCGATGCGCTGCATGAAGCCATGGCCGCCGATGACTGCACAGAG GTCGCGCAACTGGCGCACCGTCTGGCCGGCAGCTGCGATTCCCTGGGTTTCAGGGCCCTGGCCAGCACCTTGAGGACGCTGGAAACCCTGGCGTTGGCCA ACGATGAGTCGGACATCCAGCGCATGAACCCGGCGCTGGATGAGCAATTGCAGCACTCGCTCGATACCCTCAAAGGCCTGTTGCAGAGCTGACGTACAAA TTTGTTACGACTTTGTACAACTTCGATCCTTACGGTCAACGCGAACTTACATGGCTTTCCAATAATCGACGCAACCGCCGCAGCGCGGTCTTCGAAGCTT ATTGGAGATAATAATAATGAATTGCCGTAAAGCTGATCCCTCCCTGCGCCGTGACGTCCTGTCGCGCGCTGTTCACCTCAACGACTGCTGAGGTGCCGAC
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| DNA Sequence for Gene |
>PputUW4_02753
ATGAACGAAAACACTGATCGCAGCACCCATCAAAAAGGCATACAGCTGACCCGCGCCCTCAAGAGCCGGCACATCTTCATGCTGTCCCTGGGCGGCGTCA TCGGCACCGGGCTGTTCATGGGCTCCGGCGTGACCATTAACCAGGGCGGCCCGGTGGGGGCGATCCTGGCTTACCTGGTCGCGGGTTTCCTGATGTACCT GGTGATGGTCTGCCTGGGCGAACTGTCGGTGCAGATGCCGGTGTCCGGTTCGTTCCAGACCCACGCCACCAAATACATCGGCCCGGCCACCGGGTTCATG ATCGGCTGGGTGTACTGGATGAGCTGGGCCACCACCGTCGGCCTGGAATTCACCGCCGCCGGCATGTTGATGACCCGCTGGTTCCCGGCGGTGCCGATCT GGTACTGGTCGGCGCTGTTCGTGGTGGTGCTGTTCGGCATCAACGCCATGGCCACCCGCGCTTTCGGTGAAGCCGAATACTGGTTCTCGGGGATCAAGGT CGCGGCCATTCTCGGTTTCATCGTGGTCGGCGTGCTGGTGATCTTCGGCGTGATGCCCCTGAGCAGCGGCGCACCGGCACCGATGGCGACCAACCTGATC GGCGATTCGCTGTTCCCCAACGGACTGTCCGCCGTGTTCGCAGTGATGATGACCGTGGTCTACGCGTTCCAGGGTTGCGAGATCATGGGCGTGGCCGCCG GTGAAACCGACCAGCCGGAAAAGAGCATTCCCCGCGCCGTGCGCAACGTAGTGTTCCGCGTGCTGATTTTCTACGTGCTGGCGATTATCGTGCTGTCGGC CATTGTGCCGTGGCAGCAGGCGGGACTGATGGAAAGCCCGTTCGTGCAGGTGTTCGATATGGTTGGCATTCCCTACGCCGCCGACCTGATGAACTTCGTG ATCCTCACCGCGATCCTGTCGGTGGGCAACTCCGGCCTCTATGCTTCGACGCGCATTCTGTGGGCGATGTCGAAAACCGGCATGGCGCCGAAAAGCCTGT CGCCCTTGAGCAAGCGTGGCGTGCCGTTGCGGGCCCTGAGCATCACCTTGTGCTTCGCGCTGGTATCGCTGATGACCAGCTTCGTCGCCGCCGACACTTT GTTCATGGTGCTGATGGCGGTGAGCGGCATGTCCGGCACCGTGACCTGGATCGTCATCGCCCTGGCGCAATACAAGTTCCGCAAGGCGTTCCTGCGTGAC GGCGGCAAACTCAGCGACCTGAAATACCGCGCACCGTGGTTCCCGGTATTGCCGCTGATGTGCATCACGCTGTGCTGCTCGCTGTTCGTGTTCCTGGCCC TGGATGAAACCCAGCGTCCGTCGCTGTATTGGGGCTTTGGATTTATTGCGCTGTGCTATGGCGCGTACTTCCTGATTCATCGCAAGCGTCAGGGCGTGCT GGCACCGAGCTTGCCGACTGTTTAA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
TTCCTTCAATCCAACACATTCCCTGTGGGAGCGAGCTTGCTCGCGATGGCGGCATCAGGTTCAACATCACTGTTGACTGGTCTACCGCTATCGCGAGCAA GCTCGCTCCCACAGGGGTTTGCGGTGTTCGGTAAATTTGCGACCGGTCTCCTGTCGTCAGTTGTTCGAAGTTGTAACAGCGCAAACGGCTTATGCTCACG CATCTATAAAAAACACAATAAAACCAATGTGTTACAGATTTTTTTGGCTTGTTACAGCCTATTTCCCCACCGATTGCCGCCTTACTGAACAGTCGTTTAG TATGGCCTCAAGTCGCATCACCTCAGACCAATCACAATAATTCGAGGATTCCCATGACCACTCAATCGTCGCTGCTCAGCCAGGTCGAAGCAGGCGTTGC CTGGATCACCCTCAATCGCACTGCCCAGCGCAATGCGCTGGACGTTCCGACGCTGAAAAACCTGCACGCTTTGCTCGACGGTTTCAACGCCGATCCAGCG
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| Amino Acid Sequence |
>amino acid transporter
MNENTDRSTHQKGIQLTRALKSRHIFMLSLGGVIGTGLFMGSGVTINQGGPVGAILAYLVAGFLMYLVMVCLGELSVQMPVSGSFQTHATKYIGPATGFM IGWVYWMSWATTVGLEFTAAGMLMTRWFPAVPIWYWSALFVVVLFGINAMATRAFGEAEYWFSGIKVAAILGFIVVGVLVIFGVMPLSSGAPAPMATNLI GDSLFPNGLSAVFAVMMTVVYAFQGCEIMGVAAGETDQPEKSIPRAVRNVVFRVLIFYVLAIIVLSAIVPWQQAGLMESPFVQVFDMVGIPYAADLMNFV ILTAILSVGNSGLYASTRILWAMSKTGMAPKSLSPLSKRGVPLRALSITLCFALVSLMTSFVAADTLFMVLMAVSGMSGTVTWIVIALAQYKFRKAFLRD GGKLSDLKYRAPWFPVLPLMCITLCCSLFVFLALDETQRPSLYWGFGFIALCYGAYFLIHRKRQGVLAPSLPTV
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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