Strain | Pseudomonas aeruginosa strain AZPAE15055 AZPAE15055_contig_7, whole genome shotgun sequence. [Details] | |
DNA Sequence Upstream of Gene |
CCGAGTATGCCCTGCACCAGGCGCTCGGGGACTTCCTCGAAGGCCGCACCACATTGATCGTGGCCCATCGGCTGTCGGCGGTGAAGCAGGCCGACCGGGT CCTGGTCTTCGATGGCGGGCATATCGCCGAAGACGGCGATCACCAGCAACTGATCGCCGAAGGCGGCCTCTACGCCCGGCTCTACGGACATCTGCAACAG ATGTGAGGCGCCAGGCTGTCGCCTGGCGGTTTTTCTCGTATATTCCATATAAGACATCCGGTTTTTATTGGCTGCGGCAATAAAAAACGCTGTCTGTTCC GCCAGGTGCAGGGCAGGTTCGGCAAACAGCCACTAGACTCCTACTGTTTGCCAGGTGTCCGCCTCCTCCAGCGTCGTGGCTGCCGGCAGGCAAGGCCTCG GGAGTTCTGCGACGGGATCTTGAGCGGCCGACAGGTGATGCAGTCAGGGGCGACGGAGACGGCGCCCGATCGCTTAGCGCCAGTTTGAATGGTAGATGGA
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DNA Sequence for Gene |
>NT71_RS05100
ATGAGGCAGAACCGGACTCTCGACAAGCCCCGCCTGCTCGGCCTGGTATGGCCCTTCATCGTCGTGGTGCTGCTGCAGGCCATGCTGGCGGGCGGCAGTC TCTACGTCCTCTCCGCAGTGCGCAGCTATGTCGGCGGCGAAAGCCTCTGGTCGAAGGGCCAGAAGGATGCCATCTACTACCTCACCCTCTATGCCGACTC ACGCGCCGACGAAGACTTCCGCCGCTACGAGGAGGCCATCGCGATCCCCCTCGGCGACCGCGAGATGCGCCTTGCCCTGGACCAGCCCGACCCGGACATC GAGGCGGCCCGCCAGGGCATCCTCAAGGGCGGCAACCATGCCGACGACGTTACCGCGATCATCTGGCTGTACCGCAACTTCCACGACTTCAGTTACTTCG AGCGCGCCATCGAGCTGTGGCTGGTGGGCGACAAGTACGTCATGGAACTGATCGACGTCGCCGGCAAGATGCGCGCGGGCATCGGCGCCGGGCAGGCCAG CGCCGAGCAGGTGCAACAGTGGAAGACCGAGATCCACGCGATCAACGAGAAGGTCACGCCGGCGGCCAAGGCCTTCAGCGACGCCCTCGGCGAGGGCTCG CGGGCCTTGCTCAGGCTGCTGCTGGTGGCCAACCTGACCACCGCCAGCGTGCTCATCCTCCTGGCGTTCCTGCGGACCCGGCAGCAACTGACGCAGCGCC AGGAAGTGGAGAACGCCCTCGATGCCGAGCGCGAACGGGCCCAGATCACCCTGGCCTCGATCGGCGACGGAGTGATTACCGCCGATACCCAGGGGGGCAT TTCCTACCTCAACCCGGCCGCCGAGCAGATGACCAACTGGACGCTGGACAAGGCCCGCGGCCTGCCCCTGGCGTCGCTGTTCCGGATCGTCGACGAAAGC TCGCGGGAGGAGGGCATGCTGCTGATCGAGCAGATCCTCAGCGGCGAGATCGACGGCGGTCGCGAGCATTCCAAGCTGGTTCTGCGTCACGACGGCAGCA GCGTGCCGGTGACCCTGGTGGGCGCGCCGATCCACCGTGGCGGCGAGATCACCGGGGTGGTCCTGGTGCTTCACGACATGACCCGCGAGCGCCAGTACAT GGCGCGCCTGTCCTGGCAGGCGACCCACGATGCGTTGACCGGGCTGACCAACCGCCGCGAGTTCGAGTATCGCCTGCAGATAGCGCTGGAACGCCTGGAG CGCAACAGCGGGCGGCACGCCCTGATGTTCCTCGACCTGGACCAGTTCAAGCTGGTCAACGACACCTGCGGCCACGCCGCCGGCGACGAACTGCTGCGCC AGGTCTGTACCCTGCTGCAGCAAGGCTTGCGCGAGGGCGACACGCTGGCGCGGCTGGGCGGCGACGAGTTCGGCATCCTGCTGGAGAACTGTCCGGCGGA AAAAGCCGTGGAGATCGCCGACCATCTGCGCAAGACCATCCAGGACCTGCACTTCACCTGGAGCGGGCAGCCGTTCAACTGCACCGTCAGCGTTGGCCTG GTGCACCTGCTGCCGGGTATCTCGACCCTCGAGGAGGCGCTGCGCTCCGCCGATATGGCCTGCTACATGGCCAAGGAAAAGGGCCGCAACCGGGTCCAGG TGTTCCATCAGGACGACGTCGAACTATCGATGCGCTTTGGCGAGATGACCTGGGTCCAGCGCATCCACCTGGCGCTGGAGGAAGACCGCTTCAGTCTCTA TGCCCAGCCCATCGTGCCGCTGGGCGAAGGTGCGGAGGAGGGCTTGCACGTCGAACTGCTGCTGCGCCTGCGCGACGAGGGCGGGCGCCTGGTGCCGCCG CTGAGCTTCATACCCGCCGCCGAGCGCTACGGCCTGATGACGCTGATCGATCGCTGGGTGGTGGAGAATGCCTTCCGCACCCTTGTCGAACGCGCCCAGG ACCCTCGCGCCGAGCCGATCGGCACCTGCGCCATCAACCTCTCCGGCGCGACCATCGGCGACGAGTCGTTCCTGCAGTTCCTCACCGAGCTGTTCGCCCG TTACCGCATTCCGCCGCAGACGATCTGCTTCGAGGTCACCGAAACCGTGGCGGTTGCCAACCTGGCCAGCGCCATCCGCTTCATCAACGAGCTCAAGGAC ACCGGCTGTCGTTTCTCCCTGGACGATTTCTGCGCCGGCATGTCGTCCTTCATCTACCTCAAGCACCTGCCGGTGGATTACCTGAAGATCGATGGCAGCT TCGTCAAGGACATGCTCGAGGATCCCATCGATCGCGCCATGGTCCAGGTGATCAACCATATCGGCCACGTGATGGGCAAACGTACCATCGCGGAGTTCGT CGAGACCGTCGAAGTCATGGAAGCGCTGCGCGAGATCGGCATCGACTATGCCCAGGGCCTGGCCATCGGCGCGCCCCTGCCGTTCAGTCGCCAGCCTCCG GGGGCTGGAGTGGATGCCCAAGGCCTGTGGCCGAGCCTGGGACAGAACCTCCGGTAG
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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DNA Sequence Downstream of Gene |
GTGACCGCGGGGCGAAGAAAGAGTAGTTTCGCTGCTATGAGGCCGTTGCCGACAAGAAGAGAAGGGAGACGGGTGTGAGCGAGTTCTTTGACCGTACGGG CCCCTTGCAGGAGGCGGGAAGCTATCCGCAGTGGGCGCAGCAACTGATCGTCGACTGCCAGGCGAGCAAGGACCGGGTTTCCGGTCACGAGCTGTACCGG CGCATGCGCGACGCCGAGCTGAGCCCGGCGCTGATGCGCCTGTACCTGATCGGCGGCTGGCCGGTGGTCGAGCAGTTCCCCTTGTACATGTCGCAGAACC TGCTGAAGACCCGTTTCGCCCGCCATCCCGGCGAAGACATGGCGCGCCGCTGGCTGATGCGCAACATTCGGGTCGAACTCAACCACGCCGACTACTGGCT GCACTGGGCCGAGGCCCACGGCGTGAGCCTGGCCGAGATCCAGGCGCAAGACGTGCCGGCCGAACTGCACGCGCTCAGCCACTGGTGCTGGCACACCTGC
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Amino Acid Sequence |
>hypothetical protein
MRQNRTLDKPRLLGLVWPFIVVVLLQAMLAGGSLYVLSAVRSYVGGESLWSKGQKDAIYYLTLYADSRADEDFRRYEEAIAIPLGDREMRLALDQPDPDI EAARQGILKGGNHADDVTAIIWLYRNFHDFSYFERAIELWLVGDKYVMELIDVAGKMRAGIGAGQASAEQVQQWKTEIHAINEKVTPAAKAFSDALGEGS RALLRLLLVANLTTASVLILLAFLRTRQQLTQRQEVENALDAERERAQITLASIGDGVITADTQGGISYLNPAAEQMTNWTLDKARGLPLASLFRIVDES SREEGMLLIEQILSGEIDGGREHSKLVLRHDGSSVPVTLVGAPIHRGGEITGVVLVLHDMTRERQYMARLSWQATHDALTGLTNRREFEYRLQIALERLE RNSGRHALMFLDLDQFKLVNDTCGHAAGDELLRQVCTLLQQGLREGDTLARLGGDEFGILLENCPAEKAVEIADHLRKTIQDLHFTWSGQPFNCTVSVGL VHLLPGISTLEEALRSADMACYMAKEKGRNRVQVFHQDDVELSMRFGEMTWVQRIHLALEEDRFSLYAQPIVPLGEGAEEGLHVELLLRLRDEGGRLVPP LSFIPAAERYGLMTLIDRWVVENAFRTLVERAQDPRAEPIGTCAINLSGATIGDESFLQFLTELFARYRIPPQTICFEVTETVAVANLASAIRFINELKD TGCRFSLDDFCAGMSSFIYLKHLPVDYLKIDGSFVKDMLEDPIDRAMVQVINHIGHVMGKRTIAEFVETVEVMEALREIGIDYAQGLAIGAPLPFSRQPP GAGVDAQGLWPSLGQNLR
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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