Strain | Pseudomonas aeruginosa strain AZPAE15055 AZPAE15055_contig_50, whole genome shotgun sequence. [Details] | |
DNA Sequence Upstream of Gene |
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DNA Sequence for Gene |
>NT71_RS28920
GCCCCCAGCGCCGCGGCGCTGATCGCCGCCCGCGCCGGGTTGGCGGTGGGCGCGGCACTGATGATGCCGGCGACCCTGTCGATCGTCCGCCATGTCTTCC AGGACGAACGCGAACGCGCCCTGGCCATCGGCATCTGGGCCTCCGTCGCCTCTGCCGGCGCGGCGCTGGGGCCGGTGGTCGGCGGCGTGCTGCTGGAGTT CTTCTGGTGGGGCTCGGTGTTCCTCATCAACGTCCCGGTGGTGGTCGTCGCTTTGTTGCTGGCGCTGCCGGCCATCCCGGCCTGCGGCGGCCAGTCGCGG CGCCCATGGGACGCCCTCGGCTCACTGCAGGTGATGTTCGGCCTGGTCGGGGTGGTGTATGCGATCAAGGAACTCAGCACACGCGCCCCGGACTTCGGGC TGGCCGTCCTCGCCGCGCTCGGCGGCATGCTCTGCCTGTACCTGTTCGTCCGCCGCCAGCGCCGCGCCCGCGAACCGATGATCGACTTCGCGCTGTTCCG CAACCGGCGCTTCGCCCGCGGCGTCGCGGTGGCCCTGGTGGCGACCATGGCGCTGGTCGGCATGGAACTGGTGTTCAGCCAGCACCTGCAACTGGTGCAG GGCCTGACGCCGCTGAAGGCCGGCCTGTTCGTCCTGCCGATCCCGCTGGCCTCGCTGGTGGTCGGGCCGCTGGCCGGCTGGCTGGTGCCGCGCTGGGGCG AGAACCGGGTGATGTGCGCCTCCCTGCTGCTCGGCAGCGCCGGATTGCTCGGCCTGGCCCTGTCCTACCAGTCCGCCACCGGAGCGCAACTGGCCAGCCT GGTGCTGCTCGGCGTCGGCTTCGGCGGCGCGATGACCGCCGCCTCCACCGCGGTGATGCTCAACGTGGACGAACAGAGTTCCGGAATGGCGGCCGCCATC GAAGACGTGTCCTACGAATTGGGCGGGGTGATCGGCGTGACCCTGCTCGGCAGCCTGATGAGTTTCGTCTACGGGATGTCGCTGAGGCTGCCCTCGGCCG AGCTGCCGGCGCGGGTCCGCGACAGCCTCGACGACGCCCTGTTGGTCGCCGAGGGCCTGGCGCCGGAGGTCGCGTCGCGGCTCGTCGAGCTTGCCCGGCA GGCTTTCGACCAGGCCTTCGTCGCCGTGCTACTGGCCGCCGCCGCGCTGCTCTTCCTCAGCGCCATGGCGGTCCTGCGCCAGCCGCGTCCGGCTACAGAG CCAGCGCCACCAGCACCGCACACTCGGTAA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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DNA Sequence Downstream of Gene |
GTTCGACCAGCGCGCCGGCGGTGTCCCCGGTAGTGCCGCCGAGGCGCGCGAGGAAACGGCTGCGCAGCCAGGCGAAGAGCATCAGCGTCACCAGCAACGC CAGCAGGCCGGCCAGGCCGAACGCCAGGGCCAGGCCGAAACTCACCCCCAGCACCCACGGCAGGCTGCGCGCCGGCAGGTGCTCGGCGATGGCCTGGCCG AGGCCGCCGGGGCGCGCGTAGGGCGTGGTCAGGAACAGCAGCGGCAGGCTGCTGCGCGCCAGCCACGGGGCCAGCGGCAACAACCCGGCCTCGCCCTGGC CGAGCAGCGCCGCCAGGGCGGAGAACTTCAACAACAGGACCAGTACCAGGACAACCACCGCCACCGGGCCGCTGCGCGGGTCCTTCATGATCGCCAGGGT CCGCTCGCGGTCGCCCAGCCCGCCGACCCAGGCGTCCGCCATGTCGGCCAGGCCGTCCAGGTGCAGCGCGCCGCTCAGCGCCACCCACAGGCTCAGCAGC
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Amino Acid Sequence |
>MFS transporter
APSAAALIAARAGLAVGAALMMPATLSIVRHVFQDERERALAIGIWASVASAGAALGPVVGGVLLEFFWWGSVFLINVPVVVVALLLALPAIPACGGQSR RPWDALGSLQVMFGLVGVVYAIKELSTRAPDFGLAVLAALGGMLCLYLFVRRQRRAREPMIDFALFRNRRFARGVAVALVATMALVGMELVFSQHLQLVQ GLTPLKAGLFVLPIPLASLVVGPLAGWLVPRWGENRVMCASLLLGSAGLLGLALSYQSATGAQLASLVLLGVGFGGAMTAASTAVMLNVDEQSSGMAAAI EDVSYELGGVIGVTLLGSLMSFVYGMSLRLPSAELPARVRDSLDDALLVAEGLAPEVASRLVELARQAFDQAFVAVLLAAAALLFLSAMAVLRQPRPATE PAPPAPHTR
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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