Strain | Pseudomonas aeruginosa strain AZPAE15055 AZPAE15055_contig_30, whole genome shotgun sequence. [Details] | |
DNA Sequence Upstream of Gene |
GGGCATCACCGCGCCGCACGTGCTCAACCAGGACAAGGGGGTACTCGCCAGCCGCGATGGGCTGCGCCTGAGTGCTACGGAGTTGTTCAACGGCGCGGGG GGCCTGCTGTCCAGCCAGAAGGGTATCGACGTCTCCCTGGCCGGTGCGTTCGATAACCAGGCCGGCAGCCTGGACAGCCGGGGCTTCCTGACGGTGAAGT CAGCCTGGCTCGACAACCAGGGCGGTACGCTATCCAGCGCAGGGGCATTGGCAGTGACCAGCCAGGGCGCCCTGAACAATCAGGGCGGCAGACTGGCGAG CGACGCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
|
|
DNA Sequence for Gene |
>NT71_RS26760
TGGACCAGCATGACAGGGGCAACCTGGTCAGCGATACCGGCATCACGCTCGATCTGAACAAGGGAAGCCTGGTCAATCGCGCTCAAGGCCTGATCGCCAC GCCTGGCACTTTGCTCCTGCGCCAACTCGGCGTGGTGGACAACAGCGGTGGGGAAATCTCCAGCGACCGCGCGTTCACTCTTGCCACCTCCGCGTTGAAC AACCAGGGGGGACGCCTGCTCAGCGGCGGAGCCCTGACCTTGCGTATCGCGCAGGCCCTGGACAACAGCCTCGAGGGGATTGTCTCCGGTGCCGGAGGTC TGGATATCCAGGCATTCGTCCTGGACAACCGTAGTGGCTCCATCGGCAGCAAGGGCGCCATCGATATCGGTGTGACCCGCCTGGAAAACGACGCTGGCAC GCTGATCGCCGAACGCGGCCTGAAGCTGGCGGCCGATGAGGCGAACAATTCCAAGGGGCGTATCGTCGCCAAGGATGATCTGCGTGCCAAACTCGGTGCG CTGGTGCAGAACGGGGGTGAGCTGACGACTCAGGGCGCGCTGGCCCTCGACGCCGACAAAGTCGACAACGGCGCTGGTCGCATCGCCGGCAACCGAGGTG TGGTCATCGATGCCCGGCAGGTGGACAACCGTGCCGGCGAGATTGCCAGCCAGGGCGTGGCGACGCTGAATCTCACTGAGCAACTGGACAACCGTGGCGG CAAAGTCGTTGCTGACAGTGGTCTGGGCATCACCGCGCCACGCGTGCTCAACCAGGACAAGGGAGTAATCGCCAGCCGCGATGGGCTGCGCCTGAGTGGT ACCGAATTGTTCAATGGCAATGCCGGACTGCTCAGCAGTCAGAGACATATAGAGGTCACTCTGGACGGCGTGCTGGACAATCAGGGCAAGGGCGCGCTGC TCAGCGACGGTACCCTGACGGTGAGCGCCGGGCGCATACACAACCAGGACGCCACTCTGTCCAGCGCCGGTGCGCTGAGACTGAGCAGCCAGGAGGCGGT GGACAACCGTGGCGGCAAGTTGGTGACGGACTCCAGCCTGCGCCTGACCAGCGCCAGCCTGGACAACAGCCGATCAGGGATCATCAGTGCCAACGCTGCG GCGGAGATCCATACCGGGGTTCTGAACAACAGCCAGAAAGGCAATCTTGGCAGTAATGACGGGCTCGGCCTGATTGCTACTGAGGTGGATAACAGCCAGG AAGGTCGGATCACTGCCAAAGGCATGATCGACGCAAATATCAAGGCACTCGATCAGCAGGGCAAAGGGCGGCTGGTCAGTAATGCCGGCATCATACTCGA CCTGAACGAGGGAACCCTGGCCAATGGCGCTCAGGGCCTGATCGCCACGCCTGGAACCTTGCTCCTGCGCCAACTCGGCATGGTGGACAACAGCGGCGGG GAAATTTCCAGCGACCGAGCCTTCACACTCACCACCTCCGCGCTGACCAACCAGGGTGGCCGCCTGCGCAGCGGCGGTGTACTGACGTTGCGCATCGCCC AGGCTCTGGACAACAGCCTCGAAGGTGTTCTCTCCGGCACCGGAGGCCTGGATATCCGGGCGCTTGCCCTGGACAACCGCAGTGGCTCCATCGGCAGCAA GGGCGCCGTCGATATCGACGTGTCCCGTTTGGAAAACGATGACGGCGACCTGCTTAGCGAAGGTCGTCTGAAACTGACTGCCGAGCGAGCGAACAGTGTC AGGGGACGGATCGCGGCCAGGGGTGACCTGCACGCCAGCGTGACAGCCTTTAACCAGGCGGGTGGCGAATTGAGCAGCGAGGGTGCGCTGATGCTCGAGG CCGATAGCCTCGACAACCGCAGCGGCGGTCTGGTCAGTGCTGATGGCAACCTGACCGTTTCCGCCCGGAGGATCGACAACCGTGCGGGCGAAATCGCCAG CCCGGGCCAGGTGACACTGGACGTCGCCGAGCAGTTGGACAACCGAGGCGGCAAGGCCATCGGCGATAGCGGACTTCGCCTCGCCGCGCCACGGGTACTC AACCAGGACGGCGGGGTACTCGCCAGTCGTGATGGGCTGCGCCTGAATGGCGCCGAACTGTTCAATGGCAACGGCGGCCTGCTCAGCAGCCAGCAAAGCA TCGACGTCATTCTGGACGGCGTATTGGGCAATCAGGCGGGCAGCTTGAGCAGCCAGGGACGCCTGAGCGTGAAGAGCGGTCGGCTGGACAACCAGGGCGG TGCAGTCTCCAGCGCCGGGATCTTGTCGCTTTCCAGCCAGGGTGCGTTGAACAACCAGGGGGGCAGGGTGGTCACCGACGCCGGTGCCGTCCTGCGCAGC GCCAGCCTCGACAACAGCCAGGGCGGCATCGTCAGCGCCAAGGGGGCCGCGGAGATCCGTACTGGCAGCCTCAACAATAGCCAGAAGGGCGGCATAGGCA GTGGTGCCGGGCTCGCGCTGGTCGCGGACCTGGTGGACAACAGCCAGAACGGCCGGATCACTGCCAAGGGTGCGATCGATGCCAACCTGAAGGGGCTGGA TCAGCAGGGCAGCGGCAGGCTGGTCAGCGATACGGCCATCGCACTCGATCTGCGCGGGGGAGAACTGGTCAACCGTGCTCAGGGCCTGATCGCCACGCCT GGAGCCTTGCTGCTGCGGCAACTGGGTGTCGTGGACAACAGTGGCGGTGGCGAGATATCCAGCGATCGAAGCTTTACCCTCGCCGCGACCGCGCTGAGCA ACCGGGGTGGCCGCGTGATCAGCGGCGACTCCCTGACCCTGCGCATCGCCCAGGCACTGGACAACAGCCTCCAAGGCGTTCTTTCCGCAAGCGGAGGGCT GGATGTCGCTGCACTCGTCTTCGACAACCATAGCGGCATCGTTGCTAGCAAGGGCGATACACGCATCGGGGTGAACCGCCTGGAGAACGAGGCAGGCCGC GTGGTCAGCGAAGGCGCCCTGGATCTGACCGCCAAGCAGGTGAGCAGCGCCAAGGGGCGCATTGCCGCGAAGGGCGATCTGCAGGTCACGGTTGGCACCC TCGAGCAGCAGGGTGGAGAACTGGCCAGTCAGGGGACGCTGACTCTCGACGCCGATAGCCTGGATAACCGCAATGGCGGCCTGGTGAGCGCCGATGGCGG GGTCACCGCCGAGGCACGCCAGATCGATAACCGCGGTGGGGAAATATCCAGCGTGGCCAAGGTGGCTCTGGCTGTCCGGGAACAACTGGACAACCGGGGG GGCAAGGTGATCGGCGACAGTGAGCTGAGCCTAACCGTGCAGCGCCTGCTGAACCAGGCCAAGGGTGTGCTCGCCAGTCGCGATGGATTGCACCTGGACG GCGCTGAACTGCTCAATGGCGATGGCGGCCTGCTCAGCAGCCAACGCCTGGTGGATGTAACGCTCAGTGGTGCATTGGACAACCAGGGGAGCGGTGCACT GGTCAGCGAAGGGTCGCTGACAGTGAAGGCCGACCAGGTCAATAACCAGGCGGGGACTTTCTCCAGTGCGGGTAGCCTGCTCGTTACCAGCCGGGGCGAG TTGAACAACCAGGGTGGCAGGTTGGTGACCGATGCTGGAGCCACCCTGAACAGCACTGGCTTCGACAACAGCCGTGCGGGCCTGGTCAGTGCGAAAGGGG CTGTGGCCATTCGTACCGGAGCCCTGAACAACAGTCAGAAGGGATCCATTGGCGGCAATACGGGCGTCACCCTGGTCGCCGGGTTGGTCGACAACGGCCG GGAAGGACGGATCAGCACCAAGGGTACGCTCGACGCCAACCTGAAAGGGTTGCTTCAGCAGGGGGGAGGCTCGCTGGTCGGCGAGCGCGGTGTCACCCTC GACCTCAACGGTGGCACCCTGGACAACCACGACCTCGGTCTGGTTTCAACGCCTGGCGCGCTCCTGCTGCGCCAACTCGGCATGGTGGACAACAGCGTCG GCGGAGAGATATCCAGCGACCGTGCTTTCACCCTCGCCGCCAACACACTGAACAATCAGGGCGGGCGGCTGATCAGCAGCGAAGCTTTGACCCTGCGCAT CGCCAAGGCACTGGACAACAGTCTCAAGGGGCAGGTCCTGGCGACCGACGGACTGGCCATCGAGTCTCAGGTCTTGGACAACCGTGCGGGAACCATCGGC AGCAAGGGCGATGCCCGTATCAGCGTGACCAGCCTGGACAACGCCGAACAAGGCAGCCTGGTGAGTGAAGGCCGCCTGGAGCTTGTAGCCGACCAGGTGA GCAACGGCAACCAAGGCCGTATCGCCGCCAGAGGCGTGCTGGAGGCGGCGGTCGGTACGCTGCTCCAGCAAGGCGGCGAGCTGGTCAGCCAGGGGAGCCT GGACCTTCGCGCCGACACGCTCGACAACAGCCAGTCCGGGCTGATCGCCGCGAATGGCGGCATCGCTATCGAGGCGCGGCAGGTCGACAACCGCGCCGGC GAGATTTCCAGTACCTCGAAGGTCGCCGTGAACGCCCGCGAGCAACTGGACAACCGCGGCGGCAAGGTCATCGGCGACAGCGGCCTGCGCCTCACCGTGC AGCGCCTGCTGAACCAGGCCAAGGGGGTGCTGGCCGGGCGCGACGGCCTGAGCCTGGACGGCGGCGAACTGTTCAACGGCGACGGCGGGCGGCTCGACAG CCAGAACAGCCTGAGCGTGAGCCTCGGCGGCGTGCTGGACAACCAGGGCGGCGCGCTGGTCAGCGAAGGCAGCCTGACGGCGCGCGCCGCGCGCCTGGAC AACCGTGGCGGAACCTTCTCCAGCGCCGGTGCGCTGGCGCTGACCAGCCAGGCCGCGCTGGACAACCAGGGCGGCAGGCTGCTCAGCGATGCCGGCGTGA CGCTGCAGGGCGCCAGCCTCGACAACAGCCGTTCCGGCGTGATCAGCGCCAAGGGCGCGGTGGATATCCGCACCGGCGTACTGGACAACAGCCGCAACGG CGGCATCGGCAGCAACGCCGGCATCACCCTGGTGGCCGCCCGGCTGGACAACGGCCAGCAGGGCCGGGTCAGCGCCAAGGGCCTGCTCGACGCCAACCTG AAAGGCCTCGACCAGCGCGGAGGCGGCGTCCTGGTCAGCGAAACCGGCGTCACCCTCGACCTCAATGGCGGCACGCTGGTCAACCGCGACGGCGGCCTGA TCGCCACGCCCGGCGCGCTGCTGCTGCGCCAGCTCGGCGCGGTGGACAACGGCGCCGGCGGGGAAATCTCCAGCGACCGCGCCTTCACCCTCGCCGCCGC CAGCCTGGACAACCGCGGCGGGCGCCTGATCGGCGCCGCCAGCCTGACCCTGCGCATCGCCCAGGCCCTGGACAACAGCCTGGGCGGGGTGATCTCCGGC GCCGCCGGCCTGGACATCGCGGCCGCTCGCCTGGACAACAGCGCCAAGGGCACCCTGGCCAGCCGCGCCGGCATCGACCTGCGCGTCGATGGCGCGCTGG ACAACCACGCCGAAGGCACCGTCTCCGGCGCCCGCCTGACGCTCGCCAGCGCCTCGCTGGACAACAGCGGCAAGGGCCTGCTCTCTGGCAACGCCGGCCT GAGCGTCGTCACTGGTGCGCTGGACAACGCCGAGGGTGGCCAACTGATCAGCCAGGGCGTCCTGGACGTCAGCAGCGCCGAC
BLASTN Search
|
DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
|
|
DNA Sequence Downstream of Gene |
C
|
|
Amino Acid Sequence |
>hypothetical protein
DQHDRGNLVSDTGITLDLNKGSLVNRAQGLIATPGTLLLRQLGVVDNSGGEISSDRAFTLATSALNNQGGRLLSGGALTLRIAQALDNSLEGIVSGAGGL DIQAFVLDNRSGSIGSKGAIDIGVTRLENDAGTLIAERGLKLAADEANNSKGRIVAKDDLRAKLGALVQNGGELTTQGALALDADKVDNGAGRIAGNRGV VIDARQVDNRAGEIASQGVATLNLTEQLDNRGGKVVADSGLGITAPRVLNQDKGVIASRDGLRLSGTELFNGNAGLLSSQRHIEVTLDGVLDNQGKGALL SDGTLTVSAGRIHNQDATLSSAGALRLSSQEAVDNRGGKLVTDSSLRLTSASLDNSRSGIISANAAAEIHTGVLNNSQKGNLGSNDGLGLIATEVDNSQE GRITAKGMIDANIKALDQQGKGRLVSNAGIILDLNEGTLANGAQGLIATPGTLLLRQLGMVDNSGGEISSDRAFTLTTSALTNQGGRLRSGGVLTLRIAQ ALDNSLEGVLSGTGGLDIRALALDNRSGSIGSKGAVDIDVSRLENDDGDLLSEGRLKLTAERANSVRGRIAARGDLHASVTAFNQAGGELSSEGALMLEA DSLDNRSGGLVSADGNLTVSARRIDNRAGEIASPGQVTLDVAEQLDNRGGKAIGDSGLRLAAPRVLNQDGGVLASRDGLRLNGAELFNGNGGLLSSQQSI DVILDGVLGNQAGSLSSQGRLSVKSGRLDNQGGAVSSAGILSLSSQGALNNQGGRVVTDAGAVLRSASLDNSQGGIVSAKGAAEIRTGSLNNSQKGGIGS GAGLALVADLVDNSQNGRITAKGAIDANLKGLDQQGSGRLVSDTAIALDLRGGELVNRAQGLIATPGALLLRQLGVVDNSGGGEISSDRSFTLAATALSN RGGRVISGDSLTLRIAQALDNSLQGVLSASGGLDVAALVFDNHSGIVASKGDTRIGVNRLENEAGRVVSEGALDLTAKQVSSAKGRIAAKGDLQVTVGTL EQQGGELASQGTLTLDADSLDNRNGGLVSADGGVTAEARQIDNRGGEISSVAKVALAVREQLDNRGGKVIGDSELSLTVQRLLNQAKGVLASRDGLHLDG AELLNGDGGLLSSQRLVDVTLSGALDNQGSGALVSEGSLTVKADQVNNQAGTFSSAGSLLVTSRGELNNQGGRLVTDAGATLNSTGFDNSRAGLVSAKGA VAIRTGALNNSQKGSIGGNTGVTLVAGLVDNGREGRISTKGTLDANLKGLLQQGGGSLVGERGVTLDLNGGTLDNHDLGLVSTPGALLLRQLGMVDNSVG GEISSDRAFTLAANTLNNQGGRLISSEALTLRIAKALDNSLKGQVLATDGLAIESQVLDNRAGTIGSKGDARISVTSLDNAEQGSLVSEGRLELVADQVS NGNQGRIAARGVLEAAVGTLLQQGGELVSQGSLDLRADTLDNSQSGLIAANGGIAIEARQVDNRAGEISSTSKVAVNAREQLDNRGGKVIGDSGLRLTVQ RLLNQAKGVLAGRDGLSLDGGELFNGDGGRLDSQNSLSVSLGGVLDNQGGALVSEGSLTARAARLDNRGGTFSSAGALALTSQAALDNQGGRLLSDAGVT LQGASLDNSRSGVISAKGAVDIRTGVLDNSRNGGIGSNAGITLVAARLDNGQQGRVSAKGLLDANLKGLDQRGGGVLVSETGVTLDLNGGTLVNRDGGLI ATPGALLLRQLGAVDNGAGGEISSDRAFTLAAASLDNRGGRLIGAASLTLRIAQALDNSLGGVISGAAGLDIAAARLDNSAKGTLASRAGIDLRVDGALD NHAEGTVSGARLTLASASLDNSGKGLLSGNAGLSVVTGALDNAEGGQLISQGVLDVSSAD
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
|