Strain | Pseudomonas aeruginosa strain AZPAE15055 AZPAE15055_contig_24, whole genome shotgun sequence. [Details] | |
DNA Sequence Upstream of Gene |
AGGGTGCCGCGCAGCTCGCCCTTCAACGCCAGCGCGTAGCGTCCGAAGCCTTCCAGTTCGCCGAGGATGCGCAGGGTCTCCTGGTGGAACAGCTCGCCCT TGCTGGTCAGGCTGAAGCCGCCGCGGCCACGGTGGCAGAGCACGATGCCGAGCTGGTTCTCCAGTTGGCTCATGTAGGTGCTGATCGCCGAGGTCGACAG GTTCAACTCCTGCTGGGCGGCGGCGAAGCCCTGGTGGCGCACCACCGCGGCGAAGATGCGCAACAGGCGCAGGTCGGGCAAGGCGTTGGACACGGCGACT CCGGTTTGCGGGGCGAGGATTTCGGACTGCGGGCCGAGGCAAAGGCCGCCGTCCGGGCTCGGCGGCGAAGTCTAGCCGCTTCGCCATTAGTTTAGAAATC TCTGAACTGATTATTTGTAGCCAGCGATTTGACTCGCTACCGGCTGTGAAGAGAATCCGTCCGACCCCTAAAACAACCACAACGACCGTGAGGCCACCCC
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DNA Sequence for Gene |
>NT71_RS25280
GTGGACAAGAATCTCCACCAGCCCCTGGGCGGCAATGAAATGCCCCGCTTCGGCGGCATCGCCACCATGATGCGCCTGCCCCATGTCCAGTCCCCCGCCG AACTCGACGCCCTCGATGCCGCCTTCGTCGGCGTGCCCCTCGACATCGGCACCTCGCTGCGCTCCGGTACCCGCTTCGGCCCCCGCGAGATCCGCGCCGA ATCGGTGATGATCCGTCCCTACAACATGGCCACCGGCGCCGCCCCCTTCGACTCGCTGAACGTGGCGGACATCGGCGACGTCGCGATCAACACCTTCAAC CTGCTGGAAGCCGTGCGCATCATCGAGCAGGAATACGACCGCATCCTCGGTCACGGCATCCTCCCGCTGACCCTCGGCGGCGACCACACCATCACCCTGC CGATCCTCCGCGCGATCAAGAAGAAGCACGGCAAGGTCGGCCTGGTCCACGTCGACGCCCACGCCGACGTCAACGACCACATGTTCGGCGAGAAGATCGC CCACGGCACCACCTTCCGCCGCGCGGTGGAAGAAGACCTGCTGGATTGCGACCGCGTGGTGCAGATCGGCCTGCGCGCCCAGGGCTACACCGCCGAGGAC TTCAACTGGAGCCGCAAGCAGGGCTTCCGCGTGGTGCAGGCCGAGGAGTGCTGGCACAAGTCGCTGGAGCCGCTGATGGCCGAGGTCCGCGAGAAGGTCG GCGGCGGCCCCGTCTACCTGAGCTTCGACATCGACGGCATCGACCCGGCCTGGGCGCCCGGCACCGGCACCCCGGAAATCGGCGGCCTGACCACCATCCA GGCGATGGAAATCATCCGCGGCTGCCAGGGCCTGGACCTGATCGGCTGCGACCTGGTCGAAGTCTCGCCGCCCTACGACACCACCGGCAACACTTCGTTG CTGGGCGCCAACCTGCTCTATGAAATGCTCTGCGTCCTCCCGGGCGTGGTGCGTCGCTGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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DNA Sequence Downstream of Gene |
GCCGTAGCGCGACCATGACCGACGACCGCGTCGAACAGGTGCTGGAGGCCGCCCGCCGACTGGTGGCGGCCTTCGCCCGCAACGATGCCGAGGCCTATTT CGCCGCCTTCAGCGAGGACGCCAGCTTCATCTTCCACAACTGGCCTCAGCCGCTGCGCGCGCGCGGCCTACCGCAAGTTGTGGGAGCGCTGGCGACGCGA GGACGGCTTCGAAGTGCTGGCGTGCGAATCCAGCAATACCTGCGTCAGCCTGCAAGGCGACCTGGCGATCTTCAGCCACGATGTCGCCACCCGGCTGCGC CTCCAGGGAACGGAAAGCCTGAACCGGGAACGGGAAACCATCCTGTTCCGCCTAGAACAACAAGAAGGCCGTTGGCTGGCCTGCCATGAGCACTTGTCGG CGATGCCGGAGTACCTGCCATCGACTAGCTAGCTCTCCCGGGAGAACGTCATGGATAACAACAATAACCAACACGCAATCACACGCATCGAAACCTTCGG
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Amino Acid Sequence |
>agmatinase
MDKNLHQPLGGNEMPRFGGIATMMRLPHVQSPAELDALDAAFVGVPLDIGTSLRSGTRFGPREIRAESVMIRPYNMATGAAPFDSLNVADIGDVAINTFN LLEAVRIIEQEYDRILGHGILPLTLGGDHTITLPILRAIKKKHGKVGLVHVDAHADVNDHMFGEKIAHGTTFRRAVEEDLLDCDRVVQIGLRAQGYTAED FNWSRKQGFRVVQAEECWHKSLEPLMAEVREKVGGGPVYLSFDIDGIDPAWAPGTGTPEIGGLTTIQAMEIIRGCQGLDLIGCDLVEVSPPYDTTGNTSL LGANLLYEMLCVLPGVVRR
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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