Pseudomonas sp. UW4, PputUW4_01908
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Gene Ontology
| Ontology | Accession | Term | GO Evidence | Evidence Ontology (ECO) Code | Reference | Comments |
|---|
Functional Classifications Manually Assigned by PseudoCAP
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Pathways
| Database | Xref | Pathway | Version | Evidence | PMID |
|---|---|---|---|---|---|
| MetaCyc | L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline) | InterPro 5.36-75.0 |
ECO:0000259
match to InterPro signature evidence used in automatic assertion |
Functional Predictions from Interpro
| Analysis | Accession | Description | Interpro Accession | Interpro Description | Amino Acid Start | Amino Acid Stop | E-value |
|---|---|---|---|---|---|---|---|
| Pfam | PF03576 | Peptidase family S58 | IPR005321 | Peptidase S58, DmpA | 25 | 353 | 7.5E-111 |
| Gene3D | G3DSA:3.60.70.12 | - | - | - | 7 | 378 | 3.1E-128 |
| PANTHER | PTHR36512 | D-AMINOPEPTIDASE | IPR005321 | Peptidase S58, DmpA | 5 | 365 | 3.4E-103 |
| SUPERFAMILY | SSF56266 | DmpA/ArgJ-like | IPR016117 | ArgJ-like domain superfamily | 6 | 371 | 7.59E-113 |
| CDD | cd02253 | DmpA | - | - | 17 | 359 | 0.0 |
Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.