Pseudomonas sp. UW4, PputUW4_01381

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Sequence Data

Strain Pseudomonas sp. UW4 chromosome, complete genome. [Details]
DNA Sequence Upstream of Gene
TTTTGTCCTGGACATGGGCGAGCCCGTGAAAATCGTCGAACTGGCCGAGAAGATGATCCATTTGTCCGGCCTGAGTGTGCGCTCGGAAAAGAACCTGCAT GGCGACATCGCTATCGAGTTCACCGGGCTGCGCCCGGGCGAAAAGCTTTACGAAGAGCTACTGATCGGTGACAACGTAGCAGCCACACAGCATCCGATGA TCATGACGGCCAATGAGGATCACCTGTCCTGGGATTTGCTGAAGGGCAAGTTGACCGAGTTGCTCGCAGCGGTGGATCAGGACGACTACACGCGCGTCCG CCAGTTGTTGCGCGACACTGTCAGCGGCTACACCCCGGACGGTGAGATTGTCGACTGGATCTACCAGCAGCGCCGCCTTGAGCCCTGATTGTTTCATATG CAGTAACGTACACATTTTTGACAGCCCCATGGCATAGGCTAGGTTTGAAGAGCAGCTTCGGAAAAGCTGCTTTCTCAAACGACGGCATGGAGCTTCACTT
DNA Sequence for Gene
>PputUW4_01381
ATGCGTACAAGCAGTTTCTACTCTCTGGTATTCGCCCTCCTCACCAGTGCTTCTCTTACGGCAATCGCCGCGCCTGTCAAGGCGCCTGAGGCGATGACTG CGCCTCTGGTGCAGGATGTGGCCGTCCAGGCGCCATCCGGTAAAGTCGATCTCAATAGTGCTGATGTACCTACGTTGCAACGTGAGCTGACGGGAGTGGG CGAGGCCAAAGCGAAAGCAATTGTTGCTTATCGTGAAAGTAATGGTGCGTTTGCGTCAGTTGACGAGTTGCTGGAAGTGAAGGGTATCGGCAAAGCGCTT CTGGACAGGAACCGCGACAGGATCGAGGTGAACTAG
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
GGGCGGGACTGGACGACAAGGGCCGGTCATTGATCGGCCTTTGTCTATAGCGAGAGTTATGCCCGGCTGACCAGTCGCAGTACTTGAATGGTTTGTCGGT TACCTGAAATCAGGCAAAGTTCAGGCCCGCGTTGTTCAGCAGGGTCGCCAATCAGACATCGCTTTGATCGACTATCGGGCGAATTCGACGGATGAAAGTC CAGTCGTTCAGTCACCGTTGAATGCGCACTGTTCATCCGCCCCTGCATTTATCGGTCAACATGCAATACCGTTCATTCCATCGCAGAGCTTCGGCGCGGT TTTGTGTTCATTCAGGGTCTACTCTCTCATTCTGGCCGGGCCACCAACGAGTGACGTCCGCTTCGCGGAAATAAAAATTACGACTATCATATTGTGTTTG TATTATGTGCATAATAAATACCGCTTGCGCCAATGTGCCTCGGCGTCAGGCGCCCTTCAGCATTTTTTAGGAGCATCGTCATGAATTCAGTTCAGCCCCA
Amino Acid Sequence
>competence protein ComEA helix-hairpin-helix domain-containing protein
MRTSSFYSLVFALLTSASLTAIAAPVKAPEAMTAPLVQDVAVQAPSGKVDLNSADVPTLQRELTGVGEAKAKAIVAYRESNGAFASVDELLEVKGIGKAL LDRNRDRIEVN
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site