Pseudomonas sp. UW4, PputUW4_01030 (spdH)
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Gene Ontology
| Ontology | Accession | Term | GO Evidence | Evidence Ontology (ECO) Code | Reference | Comments |
|---|
Functional Classifications Manually Assigned by PseudoCAP
|
|
Pathways
| Database | Xref | Pathway | Version | Evidence | PMID |
|---|---|---|---|---|---|
| KEGG | ppuu00410 | beta-Alanine metabolism | 81.0+/01-23, Jan 17 |
ECO:0000249
sequence similarity evidence used in automatic assertion |
|
| KEGG | ppuu00330 | Arginine and proline metabolism | 81.0+/01-23, Jan 17 |
ECO:0000249
sequence similarity evidence used in automatic assertion |
|
| KEGG | ppuu01100 | Metabolic pathways | 81.0+/01-23, Jan 17 |
ECO:0000249
sequence similarity evidence used in automatic assertion |
Functional Predictions from Interpro
| Analysis | Accession | Description | Interpro Accession | Interpro Description | Amino Acid Start | Amino Acid Stop | E-value |
|---|---|---|---|---|---|---|---|
| Gene3D | G3DSA:3.50.50.60 | - | IPR036188 | FAD/NAD(P)-binding domain superfamily | 361 | 620 | 4.0E-6 |
| SUPERFAMILY | SSF51905 | FAD/NAD(P)-binding domain | IPR036188 | FAD/NAD(P)-binding domain superfamily | 66 | 471 | 7.5E-25 |
| Pfam | PF13450 | NAD(P)-binding Rossmann-like domain | - | - | 78 | 137 | 1.2E-12 |
| Gene3D | G3DSA:3.50.50.60 | - | IPR036188 | FAD/NAD(P)-binding domain superfamily | 70 | 154 | 4.1E-9 |
| PANTHER | PTHR42923 | PROTOPORPHYRINOGEN OXIDASE | - | - | 71 | 447 | 1.8E-10 |
Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.