Pseudomonas sp. UW4, PputUW4_01023

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Sequence Data

Strain Pseudomonas sp. UW4 chromosome, complete genome. [Details]
DNA Sequence Upstream of Gene
TCGAGCCGGTGGTCACTTGCTCGAACGGCGAGGTCAAGGATTTCAGCGTGCTCAAGCTCGATGACATCAAGGGCTACCGCATCCTGTTTGACTGGTACCC GACCAATGACAGCGTGGAGCCCGTCGAGCTGCGCCTGTTCATCCGCACCAACGACCGCACGCTGAGTGAAACCTGGTTGTACCAGTACTTCCCGCCAGCG CCGGACAAACGCAAGTACACCTGATGATCGGGTAGCACCCCGCCACCATTCGGTTTTCCGAACGCGACCCGCGGGTCGGTTCGGTTAACCGGATCACCCC GCTGAAATTTCAGCGCAAGAAAAAATTAATTTCCTTGTAAATCAATACTTTGACCAATACCGACTGGTCTGGCACGAGTCATGCTCTACACTTCTTCGAC GAATGTCCTTTGCGCTCACTCATCGTAGCGCTCAGGTGTTTTGCAGCACAAAAGGGCCGATGAACTGGCTCCATAAAAAAACAATGTCGAGGAAAATTTG
DNA Sequence for Gene
>PputUW4_01023
ATGCGCATCGTTCCCCATATCCTGAGCGCAGCCATTGCTGCCGCTCTGATCAGCACGCCAGTTTTCGCCGCCGAACTCACCGGCACCCTGAAGAAGATCA AAGAATCCGGCACCATCACCCTGGGCCATCGCGACGCTTCCATTCCGTTTTCCTATATCGCGGATGCTTCCGGCAAACCGGTCGGCTACTCCCACGACAT CCAGCTGAAAGTCGTCGAAGCCCTGAAAAAAGACCTCGACATGCCGAACCTCCAGGTCAAATACAACCTGGTGACTTCGCAAACCCGTATCCCGCTGGTG CAGAACGGCACCGTGGACCTCGAGTGCGGTTCCACCACCAACAACGTCGAGCGTCAGCAGCAGGTTGACTTCTCCGTCGGCATCTTCGAAATCGGTACTC GCCTGCTGTCCAAGGCAGACTCCAAGTACAAGGATTTCCCTGACCTGGCCGGCAAGAACGTCGTGACCACCGCCGGCACCACGTCCGAGCGCATCCTCAA GGCGATGAACGCCGACAAGCAGATGGGCATGAACGTCATCTCCGCCAAAGATCACGGCGAGTCGTTCCAGATGCTGGAAACCGGCCGTGCCGTTGCGTTC ATGATGGACGACGCCCTGCTGGCAGGTGAAGCGGCCAAGGCCAAGAAGGCAAGCGACTGGGCCGTGACCGGCACTCCACAGTCCTACGAAATCTACGGCT GCATGGTGCGCAAAGGCGACGAGCCGTTCAAGAAGGCTGTGGATGACGCCATCAAGGCCACCTACGCATCGGGCGAGATCAACAAGATCTACGAAAAATG GTTCATGCAGCCGATCCCGCCAAAAGGCCTGAACCTGAACTTCCCGATGAGCGACGAACTCAAGGCCCTGATCGCCAATCCGACTGATAAAGCGGCTGAC GACAAGAAGTCCTGA
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
TTTCTGACTAACCTTATCCCCTGAAAGGGCCTTAGCCCTTCCAGGGGAATGCACTCCCTGCTGGCATTTCTGGAAACACTCGAACCGGTGGCTGTCGAGC CGAGCGCGTGTGCCTGTCCCCCAAGGACAGGCGGGAACGGAGCTTCCCCCAAGCGGGCATTTGTACATCGATCGAATCCGAGGGGAGACCCTAATGAATT ACAACTGGGACTGGGGCGTGTTCTTCAAGTCCACCGGCGTGGGCAGCGAGACCTATCTCGACTGGTACGTGTCCGGTCTGGGCTGGACCATCGGCATCGC CATCGCGGCCTGGATCATCGCCCTGACACTGGGCTCGATCCTGGGCGTCATGCGTACCGTGCCGAACCGCATCGTATCGGGCATCGCCACCTGCTACGTC GAACTCTTCCGTAACGTGCCGCTGCTGGTTCAGCTGTTCATCTGGTACTTCCTGGTACCCGACCTGCTGCCGGCCGACCTGCAAGAGTGGTACAAGCAGG
Amino Acid Sequence
>extracellular solute-binding protein
MRIVPHILSAAIAAALISTPVFAAELTGTLKKIKESGTITLGHRDASIPFSYIADASGKPVGYSHDIQLKVVEALKKDLDMPNLQVKYNLVTSQTRIPLV QNGTVDLECGSTTNNVERQQQVDFSVGIFEIGTRLLSKADSKYKDFPDLAGKNVVTTAGTTSERILKAMNADKQMGMNVISAKDHGESFQMLETGRAVAF MMDDALLAGEAAKAKKASDWAVTGTPQSYEIYGCMVRKGDEPFKKAVDDAIKATYASGEINKIYEKWFMQPIPPKGLNLNFPMSDELKALIANPTDKAAD DKKS
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site