Pseudomonas sp. UW4, PputUW4_00961 (pdxJ)
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas sp. UW4 chromosome, complete genome. [Details] | |
| DNA Sequence Upstream of Gene |
CAATGGCGAGGCGCTGTTCAGCGGTCTTTACCTCAATGAACTGCTGATTCGCCTGTTGCCTGCCGAAGATCCCCATCCCGCCGTATTCGAACATTACGCC GCGACCCTGCTTGCTCTGGCCGAAGGTCGGGCGCTGGAGCCGTTGCTGCGTTCGTTCGAATGGCGCTTGCTCGATGATCTTGGCTACGGATTCTCACTGA CTGCGGATATCCACGATGAGGCCATCGCCCCCGACGGTCTCTACCGTTTGCAAGTGGATGCCGGGCTGGAGCGGGTCTACCTGCTGCAACCGGGTCTGTT CAACGGCACCGAACTGCTGGCGATGGCCGATGCCGACTGGAGCGCACCGGGTGCGTTGTCGGCGGCCAAGCGTTTGATGCGTCAGGCATTGGCCGTGCAT CTGGGTGGACGCCCACTGGTTTCCCGCGAGTTGTTTCGAAAGCCGTAATTTCCCCGTGTATGCTGTGCACCGAACTTTCTCTTCTTCTGGAGCGCTTTCC
|
|
| DNA Sequence for Gene |
>PputUW4_00961
|pdxJ
GTGACCACCAGCACCCGTATTCTTCTTGGCGTGAACATCGACCACGTTGCCACCCTGCGTCAGGCCCGGGGCACCCGTTATCCGGACCCGGTCAAGGCAG CACTGGACGCGGAAGAGGCGGGCGCTGACGGCATCACCGTGCACCTGCGCGAAGACCGACGGCACATTCAGGAGCGCGACGTTCTGGTGCTCAAGGATGT GCTGCAAACCCGCATGAACTTCGAAATGGGCATCACCGAAGAAATGATGCAGTTCGCCGAACGCATCCGCCCGGCGCATATCTGCCTGGTGCCCGAAACC CGTCAGGAGCTGACCACCGAAGGTGGACTGGATGTAGCGGGGCAGGAAGCGCGGATCAAGGCGGCGGTAGAACGCCTGTCGAAGATCGGCTCCGAGGTGT CGCTGTTCATCGACGCCGATGAGCGTCAGATCGAAGCCTCGCACCGTGTTGGCGCCCCGGCCATCGAACTGCACACCGGGCGTTATGCCGATGCCGAGAC ACCGACCGAAGTCGCCGAAGAACTCAAGCGTGTGGCCGATGGCGTGGCCTGCGGCCTGGCTCAGGGCCTGATCGTCAATGCCGGGCATGGCCTGCATTAT CACAACGTTGAAGCCGTGGCGGCGATCAAGGGCATCAACGAGCTGAACATCGGGCATGCGCTGGTGGCTCATGCGTTGTTCGTTGGCTTCAAGTCGGCGG TGTCGGAGATGAAGGCGCTGATTCTGGCGGCTGCTGCCAAGGCTTAA
BLASTN Search
|
DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
|
|
| DNA Sequence Downstream of Gene |
AAACCAACACAAAACCCTGTGGGAGCGAGCTTGCTCGCGATAGCGGTCTGACAGACACAATCGATGTGGCTGAAAGGGCCTCATCGCGAGCAAGCTCGCT CCCACATTTGTTTGGTGGTGGCTGTCAGAGCGGCGCAGGCTCTTGAGCCGGCTTGCTCTTGTCGATCCCCGGAACGAGCAGTTTGCCCTCGGCGACCTGG TCGCCTTCAAGCTGTGGCTGGGTTACCCAGGTCAGGATGTCGTAGTAGCGACGGATGTTCGCCACGAAATGCACCGGTTCGCCGCCGCGGGCGTAGCCGT AGCGGGTCTTGCTGTACCACTTCTTCTCGGACAGGCGCGGCAGGATCTTCTTCACGTCCAGCCATTTGTCCGGGTTCAACCCTTCCTTGGCCGCCAGTTT GCGTGCGTCATCCAGATGGCCGCTGCCGACGTTGTAGGCCGCCAGGGCAAACCAGGTACGGTCCGGTTCCTGGATCGAGTCGTCGAGCTGTTCTTTGATG
|
|
| Amino Acid Sequence |
>pyridoxine 5'-phosphate synthase
MTTSTRILLGVNIDHVATLRQARGTRYPDPVKAALDAEEAGADGITVHLREDRRHIQERDVLVLKDVLQTRMNFEMGITEEMMQFAERIRPAHICLVPET RQELTTEGGLDVAGQEARIKAAVERLSKIGSEVSLFIDADERQIEASHRVGAPAIELHTGRYADAETPTEVAEELKRVADGVACGLAQGLIVNAGHGLHY HNVEAVAAIKGINELNIGHALVAHALFVGFKSAVSEMKALILAAAAKA
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
|