Pseudomonas brassicacearum subsp. brassicacearum NFM421, PSEBR_a5613
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas brassicacearum subsp. brassicacearum NFM421 chromosome, complete genome. [Details] | |
| DNA Sequence Upstream of Gene |
GGCAACTGAAGCGAAACTTCCACTGATTGCCGGTGCGCTCGGTGATCTGCTGCTTGCAACCCGATTGCGGGTCTTGCAGCGGAATGTCATTGGTTTGCAC CTGCGCCGGGGTCAGGCAGACACGGATGCCTTTACCGCCCATGGTGATGCCCTGCTTTTCCAGCATCGCCCGTTGTTCCGGAGTCATCTGGTTCTGCACC TGGCCCAGGATCAGTTGCAGGTCTGGCAGGTTCTGGTTATCGACCTTCATGTTGCTGGTGGTCAGCTCCCACAAACCCGGCTGGAGCATCTGCGCCTGAG CCGCCATCGGAACCGACAACCCCATTGCCAAGGCCACACCCAGCAGACGAACATTCATTGCATAAACTCCAGAGGACAAGTGGCCGTTAGACGCCGCCCA CAGGCTTCGGTTCAAGCCCGGGACAAGTGAATTAAATAGCGACATTCGCCATGGAACATGGTCTGTTAAGCATTGAAACTTCCGGAGCAAGAATGCCCCC
|
|
| DNA Sequence for Gene |
>PSEBR_a5613
ATGGATTATTTCGGCCCGCATGTTTTCGGTTACCTGATCGCGCTGCTCCACACCCTGGGTTCCATTGCCGCCGTCCACGCCGTATTGACGGTGCGCACGG CCCAAGGCTCGATTGCCTGGGCCCTGTCGCTGCTGTTTATTCCCTACCTGACATTGATCCCTTACCTGGTTTTCGGGCGCAGCACTTTTGATGGCTACAT CAAGGCGCGCCGACAAGCCAACGAAGAGATGCGCAAGGCGATCTCCGAGTTGAACTGGCGGCCGTGGGTCGAAGAGGCTTTGACCGCTCGCGCGTCCCAG GCCTACGACTCGCTGCGGGCCATGCCCAAGCTGGGGCGCACACCTTGCCTGGCGAACAATCAGGTGCGCTTGCTCGTCAATGGGCAGGCCACGTTCGAGG CAATCTTCCAGGCCATCGATAACGCGCGGCAGGCCGTGCTGATTCAATTTTTCATCATCCACGATGACCGCCTCGGCCTACGCCTGCAGACACTGCTCCT GAAAAAAGCCGCCGAAGGCGTGGCGGTGTATCTGCTTTATGACCGCATTGGTAGCCACTCCCTGCCCCACCGCTACGTCCAGGCGCTGCGCGACGGTGGT GTCCACGTGAAAGCCTTCGCCACCCGCAGCGGCTGGCTCAATCGGTTCCAGGTCAACTTTCGCAACCACCGCAAGATCGTGGCGGTGGATGGCGTTCTAG GCTTCGTTGGCGGACACAACGTGGGCGATGAGTACATGGGCGAAAAGCCGCCCCTGGCGCCGTGGCGCGACACTCATGTCGAAGTCTGCGGCCCGGTGGT GGGGAGTATGCAAGAGTCGTTTGCCGAGGACTGGTTCTGGGCGGCCCGTTCGCTGCCACCGCTGATCCTGCCAGACACCTACCCGGACGACGGTGTGCTC TGCCAATTGCTGACCAGCGGCCCGGCCGATGCCTACGAAACCTGTTCGCTGTTTTTCGTCGAGGCTATCCATGCGGCCAGCGAGCGAGTCTGGATCACAA CGCCTTACTTCATCCCTGACGAAGCGGTGTTCGCCGCCTTGCGCCTGGCGGTGCTGCGCGGGGTGGATGTGCGCATCCTGCTGCCCTCGCGGCCGGACCA CAAGATTGTCTATGCCGCGTCCAGCCTTTATGCGTTTGAAGCGGTGCGGGCCGGTGTGCGGATGTTCCGCTATACGCCGGGTTTCCTGCATCAGAAAGTG GTGCTGATCGACCGGGAAATCAGCGCAATCGGCAGTGCGAACCTGGACAACCGTTCGTTCCGCCTGAATTTCGAAGTCATGCTGCTCACGGTGGATATCC CTTTCGCCACCGAGGTCGAGCAGATGCTTGAGCAGGACTTCGCCCAAGCCGTGGAAATCGACAAACAGGAAAGCCGGGAGACCCACCGCCTGCAGAAGAT CGGCATGCGGGTCGCCCGGCTTATTTCCCCGATTCTCTAA
BLASTN Search
|
DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
|
|
| DNA Sequence Downstream of Gene |
GGGGTGTAGATGTCGTCGCGGGTCCAGGGCAACTCATGGCTACCGTCGGCGTGGGCCTTCACCGCCAGGATCTGGTGCAGATTGATCCAGCCCTTGGCGA ACGCGTAGGCACAGCCGGCCAGGTACAGACGCCAGATCCGCAACGCCTGTTCCGGCACTTCCTTCGCGGCGGCCTCGAGATTGTCCTCCAGGCGTTCACT CCAGTGATCGAGCGTGCGAGCGTAATGCAGGCGCAGGCTTTCCACGTCGACGATTTCCAGCCCCGCTTCGCTGATCTCGGCAGAGATCATCGACAGGTGC GGCAGCTCGCCGTTGGGGAATACATACTTCTCGATGAATTCACCGGCGCCGCGACCGACTGGACGACCGTCGGTGTGCTTGGCGGTGATGCCATGGTTCA TCACCAACCCGCCCTCACGCACCGCGCCGAACAGCGTCTTGCAGTACTGCTCGAGGTTGGCGTGGCCAACATGCTCGAACATGCCAACGCTGACCACTTT
|
|
| Amino Acid Sequence |
>cardiolipin synthase
MDYFGPHVFGYLIALLHTLGSIAAVHAVLTVRTAQGSIAWALSLLFIPYLTLIPYLVFGRSTFDGYIKARRQANEEMRKAISELNWRPWVEEALTARASQ AYDSLRAMPKLGRTPCLANNQVRLLVNGQATFEAIFQAIDNARQAVLIQFFIIHDDRLGLRLQTLLLKKAAEGVAVYLLYDRIGSHSLPHRYVQALRDGG VHVKAFATRSGWLNRFQVNFRNHRKIVAVDGVLGFVGGHNVGDEYMGEKPPLAPWRDTHVEVCGPVVGSMQESFAEDWFWAARSLPPLILPDTYPDDGVL CQLLTSGPADAYETCSLFFVEAIHAASERVWITTPYFIPDEAVFAALRLAVLRGVDVRILLPSRPDHKIVYAASSLYAFEAVRAGVRMFRYTPGFLHQKV VLIDREISAIGSANLDNRSFRLNFEVMLLTVDIPFATEVEQMLEQDFAQAVEIDKQESRETHRLQKIGMRVARLISPIL
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
|