Pseudomonas brassicacearum subsp. brassicacearum NFM421, PSEBR_a4412

Gene Ontology

Ontology	Accession	Term	GO Evidence	Evidence Ontology (ECO) Code	Reference	Comments
Biological Process	GO:0016310	phosphorylation	ISM Inferred from Sequence Model Term mapped from: InterPro:PR00344	ECO:0000259 match to InterPro signature evidence used in automatic assertion
Molecular Function	GO:0000155	phosphorelay sensor kinase activity	ISM Inferred from Sequence Model Term mapped from: InterPro:PF00512	ECO:0000259 match to InterPro signature evidence used in automatic assertion
Biological Process	GO:0007165	signal transduction	ISM Inferred from Sequence Model Term mapped from: InterPro:PF00512	ECO:0000259 match to InterPro signature evidence used in automatic assertion
Molecular Function	GO:0016772	transferase activity, transferring phosphorus-containing groups	ISM Inferred from Sequence Model Term mapped from: InterPro:PR00344	ECO:0000259 match to InterPro signature evidence used in automatic assertion

Functional Classifications Manually Assigned by PseudoCAP

Pathways

Database	Xref	Pathway	Version	Evidence	PMID
KEGG	pba02020	Two-component system	81.0+/01-23, Jan 17	ECO:0000249 sequence similarity evidence used in automatic assertion

Functional Predictions from Interpro

Analysis	Accession	Description	Interpro Accession	Interpro Description	Amino Acid Start	Amino Acid Stop	E-value
PRINTS	PR00344	Bacterial sensor protein C-terminal signature	IPR004358	Signal transduction histidine kinase-related protein, C-terminal	611	624	8.5E-15
SUPERFAMILY	SSF103190	Sensory domain-like	IPR029151	Periplasmic sensor-like domain superfamily	82	205	3.14E-14
PRINTS	PR00344	Bacterial sensor protein C-terminal signature	IPR004358	Signal transduction histidine kinase-related protein, C-terminal	573	583	8.5E-15
FunFam	G3DSA:1.10.287.130:FF:000049	C4-dicarboxylate transport sensor protein DctB	-	-	385	472	1.8E-33
SMART	SM00388	HisKA_10	IPR003661	Signal transduction histidine kinase, dimerisation/phosphoacceptor domain	409	477	6.1E-6
Gene3D	G3DSA:1.10.287.130	-	-	-	385	472	2.2E-18
CDD	cd12914	PDC1_DGC_like	-	-	83	197	4.02928E-9
SMART	SM00387	HKATPase_4	IPR003594	Histidine kinase/HSP90-like ATPase	516	627	1.3E-29
Gene3D	G3DSA:6.10.250.3020	-	-	-	52	113	2.9E-8
PANTHER	PTHR43065	SENSOR HISTIDINE KINASE	-	-	286	627	1.2E-50
Gene3D	G3DSA:3.30.565.10	-	IPR036890	Histidine kinase/HSP90-like ATPase superfamily	473	626	1.7E-35
Gene3D	G3DSA:3.30.450.20	PAS domain	-	-	197	312	2.8E-24
PIRSF	PIRSF036431	HK_DctB	IPR017055	Signal transduction histidine kinase, DctB (C4-dicarboxylate transport system regulator)	8	632	0.0
Gene3D	G3DSA:3.30.450.20	PAS domain	-	-	117	195	7.5E-29
SUPERFAMILY	SSF47384	Homodimeric domain of signal transducing histidine kinase	IPR036097	Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily	394	475	2.75E-9
SUPERFAMILY	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase	IPR036890	Histidine kinase/HSP90-like ATPase superfamily	482	625	1.05E-33
PRINTS	PR00344	Bacterial sensor protein C-terminal signature	IPR004358	Signal transduction histidine kinase-related protein, C-terminal	555	569	8.5E-15
CDD	cd00082	HisKA	IPR003661	Signal transduction histidine kinase, dimerisation/phosphoacceptor domain	407	473	4.11835E-6
Pfam	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase	IPR003594	Histidine kinase/HSP90-like ATPase	517	625	9.3E-20
Pfam	PF02743	Cache domain	IPR033479	Double Cache domain 1	54	245	4.9E-16
PRINTS	PR00344	Bacterial sensor protein C-terminal signature	IPR004358	Signal transduction histidine kinase-related protein, C-terminal	586	604	8.5E-15
Pfam	PF00512	His Kinase A (phospho-acceptor) domain	IPR003661	Signal transduction histidine kinase, dimerisation/phosphoacceptor domain	411	475	3.6E-6
Coils	Coil	Coil	-	-	345	407	-

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.