Pseudomonas brassicacearum subsp. brassicacearum NFM421, PSEBR_a4187

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments
Molecular Function GO:0004848 ureidoglycolate hydrolase activity
ISM
Inferred from Sequence Model
Term mapped from: InterPro:G3DSA:2.60.120.480
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Biological Process GO:0000256 allantoin catabolic process
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PF04115
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0050385 ureidoglycolate lyase activity
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PF04115
 ECO:0000259
match to InterPro signature evidence used in automatic assertion

Functional Classifications Manually Assigned by PseudoCAP

Pathways

Database Xref Pathway Version Evidence PMID
KEGG pba01100 Metabolic pathways 81.0+/01-23, Jan 17 ECO:0000249
sequence similarity evidence used in automatic assertion
MetaCyc allantoin degradation to glyoxylate I InterPro 5.36-75.0 ECO:0000259
match to InterPro signature evidence used in automatic assertion
MetaCyc allantoin degradation to glyoxylate III InterPro 5.36-75.0 ECO:0000259
match to InterPro signature evidence used in automatic assertion
KEGG pba00230 Purine metabolism 81.0+/01-23, Jan 17 ECO:0000249
sequence similarity evidence used in automatic assertion

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
Gene3D G3DSA:2.60.120.480 Ureidoglycolate hydrolase IPR024060 Ureidoglycolate lyase domain superfamily 1 167 1.6E-60
Hamap MF_00616 Ureidoglycolate lyase [allA]. IPR023525 Ureidoglycolate lyase, bacterial 2 163 41.407715
SUPERFAMILY SSF51182 RmlC-like cupins IPR011051 RmlC-like cupin domain superfamily 1 162 7.11E-59
PIRSF PIRSF017306 Ureidoglycolate_hydrolase IPR007247 Ureidoglycolate lyase 2 163 1.6E-49
Pfam PF04115 Ureidoglycolate lyase IPR007247 Ureidoglycolate lyase 2 157 1.1E-50
CDD cd20298 cupin_UAH IPR047233 Ureidoglycolate amidohydrolase, cupin domain 54 143 1.2097E-43
PANTHER PTHR21221 UREIDOGLYCOLATE HYDROLASE IPR007247 Ureidoglycolate lyase 3 164 1.3E-41

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.