Pseudomonas brassicacearum subsp. brassicacearum NFM421, PSEBR_a3319
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Gene Ontology
| Ontology | Accession | Term | GO Evidence | Evidence Ontology (ECO) Code | Reference | Comments |
|---|
Functional Classifications Manually Assigned by PseudoCAP
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Functional Predictions from Interpro
| Analysis | Accession | Description | Interpro Accession | Interpro Description | Amino Acid Start | Amino Acid Stop | E-value |
|---|---|---|---|---|---|---|---|
| Gene3D | G3DSA:3.10.450.40 | - | - | - | 5 | 133 | 1.3E-13 |
| PANTHER | PTHR38595 | CYTOPLASMIC PROTEIN-RELATED | - | - | 6 | 129 | 9.1E-13 |
| Pfam | PF04965 | Baseplate wedge protein gp25 | IPR007048 | IraD/Gp25-like | 29 | 120 | 9.3E-17 |
| NCBIfam | TIGR03357 | JCVI: type VI secretion system baseplate subunit TssE | IPR017737 | Type VI secretion system protein TssE1-like | 8 | 134 | 1.0E-29 |
| SUPERFAMILY | SSF160719 | gpW/gp25-like | - | - | 28 | 132 | 3.53E-15 |
Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.