Pseudomonas brassicacearum subsp. brassicacearum NFM421, PSEBR_a3312
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas brassicacearum subsp. brassicacearum NFM421 chromosome, complete genome. [Details] | |
| DNA Sequence Upstream of Gene |
GACGAAACCTTGCTGTTCAGCCCCTGGCCCGGACAACTGGCCTGGCAGCAGCACCCCCTCGAATCACGCATGTATGCCAGTCGCCAGGCCGGCGAGCGCT TGCCGGCGGCGATCAAGAAACTGCTGGACGAGCAGATGCCCGGCACCCGGGACCTGGCGAATGTCTACCTGCAATGCCTGATCCTCGGGTTCCAGGGCCG GTTGCGCGGCGAGCCTGGCCAGGTTCAGCATGAGAAATGGCGCCTGGCGTTGTTCACGTTTGCCTGGCAGCACGAACCCGATTATGTCGATGTCAGCCAG CGCCTGGCGCTGTCTTCGGCGACGCCGCCAGTGCGCATGCCGGTGCAGCAATCACTGCCGGACGGCTTTCGCCTGGGGCTGGCGATCCTGGCGATGGTGT TGTTGTTGACCGGGCTGGGGCAGGTGTTCTGGCGTGACATTCGTTTGGAGCTCGAACCGGTGCTGCAACTGAACGAGTCGGTGGTTCAGGAGCAGGACTC
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| DNA Sequence for Gene |
>PSEBR_a3312
ATGAGCACCCTGAGTATCGTTGCCCTGGTGGTGCTCGCCATCGTCGTGGTGCTGTTGATCGCGGCCCTGATCTGGTGGCTGCGGACCCAAGGCGGAGCGG CGATCCGCAGTTTCTATGGGGCGGTGCGCCGCATGGAACAGGAGCAGGGCACCCGGGACCGCTATCAGATGCCTTGGCTGATGATGCTCGGTAACGAAAG CGACGGCGCCCAACTGTGCGCCCAGTGGCGCTTGCAACCGACCGACAAGGCCGCCTGGTTCGGGCGCTGGTTTTCCGATGCCGAGGGCTCGGTGCTGGTG GTGCCCCAGGCGTTGTTCCTGCCCGATGAAGGCATGAACCGGCAACGGGGTAATTGGTGGCGCCTGTTGGGGCTGATGTTGCGCTTGCGCAGCAAGCGAC CATTGGATGCGGTGATCTGGACGGTGCCGTTCAGCACCCTCGATGACATCGAACACACCACCGAACTGAGCCTCAAGGTCCGGCGGTGCTTTATCGACCT GTTGCAACGGTTCGGCCTCAGCCTGCCGGTGTACGTGGTGATCACCGGGATGGAAGAGCTGCCCGGGGTCCAGGAACTGGTCAGCGCGCTGCCCGCCGAG GCGCGTGAATCGATGCTGGGCTGGTCCTCGCCCTATTTGCCGGATGCGGCCTGGCAGTCGCAGTGGAGTGACCAGGCCCTGGACCAGGTCAACGCGGCGC TGTCGCAATCGATCATCGAGATCGGTGCGCTGTCGGGGCAATTGGGCAGCGATCTGTATGGGTTGCCGGAGCGCTTCGAAGGCTTGCGACGGGCCTTGCA GATCCTGTTGGAGCCGGTGTTCCAGGGCAATGCCCAAGGCGAAGCGCCGCGTTGTCGCGGGGTGTATTTCACTGCCAGCCAGGCGCCGGCTGTCAGCGGT GATGGTTTGACCGCCGCCGACAGTGCCCAGCGGCAAACCGTGTTCGCCCGTCAATTGTGGTCACGACGGCTGGTGGCCGAGCGTGGCCTGGCCCAGCCCG TGCCGCGGCTGTTGCGCCTGCGCCAGCGCGGGCATCGGCTGGTCGGAGCGGTGGCGTTGGTGGTGGGCCTGGTCTGGTTGGGTGGCATGGTCTGGGTCTG GCACGATTCGGTGGAAGAAGCCGAAGGGCTGTCGCGGTTGATCCTCAGCACCCATAAGAATCACCTCGTGGTCGATCCTGACGAACCGCAGCTGGAACCG ACCCGGCACAACGTGCAGAACTATTGGAACATGTTGGAAAAGGCCCCGCGCTGGCGCTTTGTCTCGGTGGTCTTTCCCACTTCGTGGTTCTCTTCCGTGG ACACGCAGCTGGAGAATGGGTTGCGCCTGACTGCTCGGCACCATTGGATATTGCCTCTGCGGGACCTGCTCAATTCAGACCTGGAACAGCTCAAATCCAT CCGCAACACCGAGCGGCGGGGCAATGTGGAAAACGAAGATCCGGCGCAATGGCAGAGCTACGTGAAGGCCAAGGCGCTGGTGGACCTGGCGGTACGCCTT GAACAGCACAACCAGATGTTCAGCCAGGTGGTGAACGATCCCAAGGCACCGCTGGACGAACTGGTGCAACTGAGCAACACCGCCTTGTCCCTGGGGCTCA ACACCGGCACCTTGAGCCGGCCCCGGTTCTATAACCGGGTGCTGTTCGATGCCCAGAACAGCGATTTGAAAGGGCTGGACCTGAACGCCGCGCGCCCGGT GATCTCCGATAACTTCACCGGCCTGATGCAGCGCTGGTTGGACCATTACTTCCTGGCGGACAACTTCGTGCGCCAGGCCGGCTACCTCAAACTGCACCTG CAACGGCTGGAGGCCGGCGGCGGCAACTCCTTGAGCGAACTCGAAGACCTGATGGCGCTGATCGACGATTTGCAGACCCTGGTCAGCCTGACCAACTCGG CCTGGGGGCGGGGCAAGGGCCAGGACCTGGTCCCCGGCTACAGCCAGATGCTGGACAAGGTCAGCCACAGTACTTTGCTGGGGCCGGATATCGAGCAGGA CCTGGAGAGCCAGGCGGCGAAGTTGCAGCAGAGCTTTCGTGACCAGTGGATCGTCCAGACCGGCTCCCGGGACAATCTGCTGGTGCAACAGGGCAGTGGC CTTCTGGTCTTGCAAGACCATGTCACGGCGCTGGACGGTGCAGTGCAGGCTTTGTTCAAGCGTGATTTCGTGGCGCTGGCCATGCAGAAGGATCCGTCGG GCAACAACCCCGATTCGATGGGCCAGGGCGATGGCAGCGATGATTTCAGCGTCGCGCTGAACTACTTCGCCAGCTACAAGAGCTATGCCAATGAAGAAAT GCCGCGCATTCCGCCGGATTACCGTGACGCGCTGATGCAGGCCGCTGAAGGTGCCGCGGCCCGGGCCATGTGGTTGAGCCTGGATGAAAGCGACGAGGCG TTGCCCGGCATGGGCTTCAATGTGCAAACGACCCAGGCCGTTGCGCTGCAAAAGGCCTTTATGGACGTGCACCGTGGCGACCTGGCGATCCGTTTCCAAC GTCTGCTCAATCGCCGGGCATTGGCGCAGCTCAAGAGTGGCCTGGACGAAATCGATGCCCAGCCGCTGTTCAGCCAGCGGGCCGATGTCCAGCGTTGGGA TGGCTCGAAAAACTTCGGCTTGCAACTCTACGGTGCCAGCGATCCACAAGACCTGAAGCTGAACCTGGCCCAGCAATTCGGCGCGATGCTGCAGATCGCC GAGCAGCGAATGCCCGCGCTGGAATGGTTGATTGTCCAGCAGGACAACCTGTCGGCCCTGGAGCACGACCAGGTGGCACGCTTCATGGCCCTCAACGATG AATTGCTCAAGTACAAGAACCAGAACCCGGCCAGCTCGGCGGCTCAGCTGGAACAATTGGTGAGTCGGGACTTTATCGCCATGGACACCACCTCCTGCGC GCAGATCTTGCAGACCTCCAGCCTGCCCGGTGGTCGCGGTGACCTGGCCCTGCGCACGGTCGCGTTGCAGCAGGGCGCCCTGCAACGGTGCCTGTACCTG CAACAGAGCCAGGCGGCGACGGCCTGGAATGACGTGGCCAACTATTTCAATCAATACCTGGCCGGGCGCTTTCCGTTTTCTCAGGATGTGCGGGCCAGCG ATGCCGACCCGGCGCGGGTCCAGCGTTTGCTGGAACTGATTGACACACGCCTGCCCCTGGCCCAGGCCGGACTGACGCTGAGCCAGACGCCGGAGCGGCT GGCGGCCGAGGATTTCCTCAACCGTTTGAAACAGGCCGGTACTTGGCTCGGGCCGCTGTTCGTGCGGGACAAGAGTGGCATTCTTGGGGTGGAAATGGAC GTGCGCTGGCGTACCGATCGCGATGAGGAGCGCGGCGCCGACCAGGTGATCGCCTGGAGCCTGGACGCCGGCAACCAACAGATCAGCTACCCCGGCGGCG GCCAGCAGAACCTGCGCTGGATGGTCGGCCAGCCCGTACGCCTGACCTTGCGCTGGGCCCGTAACGGTTATCAGCGTCCGGCCAACGACCCGCTGCAACC GAACCTGGTGGTGCGCGACCTGGAGGCCGGTTGGGAGTACCAGGGGCCCTGGTCGTTGCTGCGCCTGATGCGCTCGCTGGTGTCGGTCCAGCGCCAGCCA AATGTCGACTACACCGATTTTCCCCTGGCCCTGCAACTGCCGGTGACCGCCCAGACCCAGGCCAGCACGGCGCAGCAAACGTTGATGTTCATGCGCCTGT CGTTGATGAGCCAGGGCTCCAAGCTGCCTTTGTCGATCCCACCGCTGCCGACGCGGGCGCCCCGTTCACCTTTCATGGCGACCGCATCGAGCCCCGCCAT CGCCACCCGTGAGGAGGGCCTGTGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
GCTTGCCGATATCGCCTTTGCCTGAGCTGGTCAGCCAGTTGCTCGAGCCGATCAGCGCCGAATCGCCCTGTGGCCCGGACCTGCGCTACGAACCGGAATA CGACCAGTTGCGCGAATTGCGCCGGGAAGACGACACCAGCCTGCCCACCGGCGTGTGGCAGTCTTCGATCAAGCGCGCCCTGTGGCCAGACCTGGAACGG CTTGCGACCACGTTGCTGCTTGAGCGCAGCAAGGACCTGATGATCAGCGCCTGGCTGGGGGAGGCCTGGCTGCATATGGCCGGGCTGGAGGGGTTGCCGG GTAGCCTGGCGCTGGTGGCGGGGCTGTGTGAGCGCTATCCGGAGCAGTTGCACCCCCAGGCCGAGGACGGCGACCAGTCGTGGCGGGTGATCCCGCTGGA GTGGCTGGCCCGGCGCTACAGCGAAGTGCTGCTGACGCGGGTGCCGTTGTTCGACGGCCGGGAGCAGGCCTTCGCCGCTTTCTCCCTGGACGACTGGCAA
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| Amino Acid Sequence |
>hypothetical protein
MSTLSIVALVVLAIVVVLLIAALIWWLRTQGGAAIRSFYGAVRRMEQEQGTRDRYQMPWLMMLGNESDGAQLCAQWRLQPTDKAAWFGRWFSDAEGSVLV VPQALFLPDEGMNRQRGNWWRLLGLMLRLRSKRPLDAVIWTVPFSTLDDIEHTTELSLKVRRCFIDLLQRFGLSLPVYVVITGMEELPGVQELVSALPAE ARESMLGWSSPYLPDAAWQSQWSDQALDQVNAALSQSIIEIGALSGQLGSDLYGLPERFEGLRRALQILLEPVFQGNAQGEAPRCRGVYFTASQAPAVSG DGLTAADSAQRQTVFARQLWSRRLVAERGLAQPVPRLLRLRQRGHRLVGAVALVVGLVWLGGMVWVWHDSVEEAEGLSRLILSTHKNHLVVDPDEPQLEP TRHNVQNYWNMLEKAPRWRFVSVVFPTSWFSSVDTQLENGLRLTARHHWILPLRDLLNSDLEQLKSIRNTERRGNVENEDPAQWQSYVKAKALVDLAVRL EQHNQMFSQVVNDPKAPLDELVQLSNTALSLGLNTGTLSRPRFYNRVLFDAQNSDLKGLDLNAARPVISDNFTGLMQRWLDHYFLADNFVRQAGYLKLHL QRLEAGGGNSLSELEDLMALIDDLQTLVSLTNSAWGRGKGQDLVPGYSQMLDKVSHSTLLGPDIEQDLESQAAKLQQSFRDQWIVQTGSRDNLLVQQGSG LLVLQDHVTALDGAVQALFKRDFVALAMQKDPSGNNPDSMGQGDGSDDFSVALNYFASYKSYANEEMPRIPPDYRDALMQAAEGAAARAMWLSLDESDEA LPGMGFNVQTTQAVALQKAFMDVHRGDLAIRFQRLLNRRALAQLKSGLDEIDAQPLFSQRADVQRWDGSKNFGLQLYGASDPQDLKLNLAQQFGAMLQIA EQRMPALEWLIVQQDNLSALEHDQVARFMALNDELLKYKNQNPASSAAQLEQLVSRDFIAMDTTSCAQILQTSSLPGGRGDLALRTVALQQGALQRCLYL QQSQAATAWNDVANYFNQYLAGRFPFSQDVRASDADPARVQRLLELIDTRLPLAQAGLTLSQTPERLAAEDFLNRLKQAGTWLGPLFVRDKSGILGVEMD VRWRTDRDEERGADQVIAWSLDAGNQQISYPGGGQQNLRWMVGQPVRLTLRWARNGYQRPANDPLQPNLVVRDLEAGWEYQGPWSLLRLMRSLVSVQRQP NVDYTDFPLALQLPVTAQTQASTAQQTLMFMRLSLMSQGSKLPLSIPPLPTRAPRSPFMATASSPAIATREEGL
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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