Pseudomonas brassicacearum subsp. brassicacearum NFM421, PSEBR_a3172

Gene Ontology

Ontology	Accession	Term	GO Evidence	Evidence Ontology (ECO) Code	Reference	Comments
Molecular Function	GO:0009055	electron transfer activity	ISM Inferred from Sequence Model Term mapped from: InterPro:PF13442	ECO:0000259 match to InterPro signature evidence used in automatic assertion
Molecular Function	GO:0020037	heme binding	ISM Inferred from Sequence Model Term mapped from: InterPro:PF13442	ECO:0000259 match to InterPro signature evidence used in automatic assertion

Functional Classifications Manually Assigned by PseudoCAP

Pathways

Database	Xref	Pathway	Version	Evidence	PMID
KEGG	pba00910	Nitrogen metabolism	81.0+/01-23, Jan 17	ECO:0000249 sequence similarity evidence used in automatic assertion
KEGG	pba01120	Microbial metabolism in diverse environments	81.0+/01-23, Jan 17	ECO:0000249 sequence similarity evidence used in automatic assertion

Functional Predictions from Interpro

Analysis	Accession	Description	Interpro Accession	Interpro Description	Amino Acid Start	Amino Acid Stop	E-value
SUPERFAMILY	SSF51004	C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase	IPR011048	Cytochrome cd1-nitrite reductase-like, haem d1 domain superfamily	134	559	1.27E-123
SUPERFAMILY	SSF46626	Cytochrome c	IPR036909	Cytochrome c-like domain superfamily	9	150	9.46E-22
Pfam	PF02239	Cytochrome D1 heme domain	-	-	162	554	0.0
Gene3D	G3DSA:1.10.760.10	-	IPR036909	Cytochrome c-like domain superfamily	21	132	1.2E-28
FunFam	G3DSA:1.10.760.10:FF:000027	Nitrite reductase	-	-	27	132	9.0E-50
FunFam	G3DSA:2.140.10.20:FF:000001	Nitrite reductase NirS	-	-	134	559	0.0
Pfam	PF13442	Cytochrome C oxidase, cbb3-type, subunit III	IPR009056	Cytochrome c-like domain	51	125	3.0E-10
Gene3D	G3DSA:2.140.10.20	-	IPR003143	Cytochrome cd1-nitrite reductase, C-terminal domain superfamily	133	559	0.0

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.