Pseudomonas brassicacearum subsp. brassicacearum NFM421, PSEBR_a1926

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments
Molecular Function GO:0016899 oxidoreductase activity, acting on the CH-OH group of donors, oxygen as acceptor
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PIRSF000136
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Cellular Component GO:0016020 membrane
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PF04030
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0050660 flavin adenine dinucleotide binding
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PF01565
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0003885 D-arabinono-1,4-lactone oxidase activity
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PF04030
 ECO:0000259
match to InterPro signature evidence used in automatic assertion

Functional Classifications Manually Assigned by PseudoCAP

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
Gene3D G3DSA:1.10.45.10 - IPR016171 Vanillyl-alcohol oxidase, C-terminal subdomain 2 417 453 1.5E-11
Pfam PF04030 D-arabinono-1,4-lactone oxidase IPR007173 D-arabinono-1,4-lactone oxidase, C-terminal domain 199 449 2.0E-62
NCBIfam TIGR01679 JCVI: FAD-linked oxidoreductase - - 32 453 0.0
PIRSF PIRSF000136 LGO_GLO IPR010031 L-gulonolactone/D-arabinono-1,4-lactone oxidase-like 22 454 4.6E-91
Gene3D G3DSA:3.30.70.2520 - - - 323 414 2.7E-26
Gene3D G3DSA:3.30.43.10 - IPR016167 FAD-binding, type PCMH, subdomain 1 28 92 1.5E-20
SUPERFAMILY SSF56176 FAD-binding/transporter-associated domain-like IPR036318 FAD-binding, type PCMH-like superfamily 28 202 3.69E-40
PANTHER PTHR43762 L-GULONOLACTONE OXIDASE IPR010031 L-gulonolactone/D-arabinono-1,4-lactone oxidase-like 32 452 1.1E-89
Pfam PF01565 FAD binding domain IPR006094 FAD linked oxidase, N-terminal 43 174 1.4E-21
FunFam G3DSA:3.30.70.2520:FF:000002 FAD-linked oxidoreductase - - 323 414 1.9E-56
Gene3D G3DSA:3.30.465.10 - IPR016169 FAD-binding, type PCMH, subdomain 2 94 220 2.7E-26

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.