Pseudomonas brassicacearum subsp. brassicacearum NFM421, PSEBR_a531
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Gene Ontology
| Ontology | Accession | Term | GO Evidence | Evidence Ontology (ECO) Code | Reference | Comments |
|---|
Functional Classifications Manually Assigned by PseudoCAP
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Pathways
| Database | Xref | Pathway | Version | Evidence | PMID |
|---|---|---|---|---|---|
| KEGG | pba02040 | Flagellar assembly | 81.0+/01-23, Jan 17 |
ECO:0000249
sequence similarity evidence used in automatic assertion |
|
| KEGG | pba02030 | Bacterial chemotaxis | 81.0+/01-23, Jan 17 |
ECO:0000249
sequence similarity evidence used in automatic assertion |
Functional Predictions from Interpro
| Analysis | Accession | Description | Interpro Accession | Interpro Description | Amino Acid Start | Amino Acid Stop | E-value |
|---|---|---|---|---|---|---|---|
| Gene3D | G3DSA:3.30.1330.60 | - | IPR036737 | OmpA-like domain superfamily | 105 | 284 | 7.1E-41 |
| Pfam | PF00691 | OmpA family | IPR006665 | OmpA-like domain | 166 | 254 | 2.7E-13 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | - | - | 276 | 323 | - |
| PANTHER | PTHR30329 | STATOR ELEMENT OF FLAGELLAR MOTOR COMPLEX | - | - | 10 | 276 | 1.7E-60 |
| Coils | Coil | Coil | - | - | 111 | 131 | - |
| SUPERFAMILY | SSF103088 | OmpA-like | IPR036737 | OmpA-like domain superfamily | 164 | 269 | 2.09E-21 |
| Pfam | PF13677 | Membrane MotB of proton-channel complex MotA/MotB | IPR025713 | Motility protein B-like, N-terminal domain | 16 | 63 | 2.5E-16 |
Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.