Pseudomonas brassicacearum subsp. brassicacearum NFM421, PSEBR_a100
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas brassicacearum subsp. brassicacearum NFM421 chromosome, complete genome. [Details] | |
| DNA Sequence Upstream of Gene |
TTGGTCTTGGCGATCAGCTTCGTTTCGAAATCCAGCCCCGGCGACATGTCCCAATAGGCATGGCTGGGCCGCGCATAGCAGTAGATACAGCCGTGTTCGC AGCCTCGGTACGGGTTGATCGAGCGGTCGAAGGGAATATCGGACGAGGTGTTGCGGGTAATGATGGTCTTGGCCATTTCGATGCGCACTTCAGTGCCCTG GGTCGGCGGGACTTCCTGATACCAGCCGTCATCTTCGGCCACCGAGCGACTCGGGGCGAAGCGGTTGTGCGGGTTGGTCGCGGTGCCGCGGCCGCGAGGC GGAAGTGAAGCTGACATGGGAGCACTCCGAAAGGCTGTATGTGCATACAGTATTCGTTGCATTCGATTAAGACCAGTGCCATTCAGCAGCCCGAATACCC GATCATCGTTCACAACGCTTTGACGTTCTCCTCACAGGCTTTTAACCGCAGCGAGCCGAAACTGTCGATCTCGCATTCCTTCGTTTTCGGTCGTCCGTTA
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| DNA Sequence for Gene |
>PSEBR_a100
ATGCTCAAGCTCTGTTCCCGTTCACTGCTCTGCCTGGCCTTGCTCATCGGGCTGGCCGAGATCCCCGCCCAAGCGGCCGATTCCCCTGATGCGAGGCCCG CTGAATGGGCGCAGCCGGTGGAAAAGGACTACAACCTCTACCAGATGTCACCGACGCTCTACCGCAGCTCCCTGCCGGATGGCGCAGCGCTGCCCTTGCT GACCAAACTCAGGATTGGCACGGTCATCACCTTCCTGCCGGAGTCGGACAAGCGTTGGCTGTCCACCCCCGGCATCGAGCAAGTGCAGTTGCCCTATCGC ACCAATCATGTCGATGACAGCGACATCCTCAGGGCTTTGCGCGCCGTCCAGGCGGCCGAAGCCAAGGGGCCGGTGCTGATGCACTGCAAGCACGGCTCGG ACCGCACCGGGCTGGTCGCCGCCATGTACCGGGTGGTGGTGCAGGGTTGGAGCAAAGAGGACGCCTTGAACGAAATGACCGAAGGGGGCTTCGGTGACAG TCATCACTTCAAGGACGGGGTGCGCTACATGATGCAGGCCGATGTCGACAAACTCCGTGTGGCGCTGGCGAATGGCGATTGCAGCACCAGCGTCTTTGCC CTTTGCTCCCTGGAAAGCTGGGTCAACTCAACCACGACGACGCGTCACCTCGACCCTCAGGTTGTGCTTCCCGAGCGATGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
TCGCTACGTGCCCAGAAACGCCGTGATCGACTCAGACAGCGGTCGCGAATCGCCCGGCCCGAAAATCGTCTCGCGCAACGCCTGCCCGGTTTCCCGGTTG AACAGCCCGTCGCGCTTGAATCTCTGGAACACGGTTTTCGCCAATTCCCTCGACCAGGCATAGGCATAGAGCCCGGCACCATAGCCGGTCACCATGTAGT CCAGGCCATTGGGCCAGCGTTCGGTTGCAGACACCGGCAAATGCCCGACCTGCGCGCTGACTTGGTCGAATACGTGTTGGGCGGTGCGTCCATCACCGTG GCTGCGGTGCAATTCCATGTCGAACAGCGCATCGCGCAAGAACGAGGCGCTGTCCCAACTGGTCTGGGTATGGAGGTAGACCAGCAATTGATCGGCGAGG GTGTCCGGCAAGGGCGCCCCGGTTTGGTGATGTTTCGAGATACGCATCAGGCAGGGTTTGGCGAAGCACCATTGCTCGAACAACACCCCGGCGAATTCGG
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| Amino Acid Sequence |
>hypothetical protein
MLKLCSRSLLCLALLIGLAEIPAQAADSPDARPAEWAQPVEKDYNLYQMSPTLYRSSLPDGAALPLLTKLRIGTVITFLPESDKRWLSTPGIEQVQLPYR TNHVDDSDILRALRAVQAAEAKGPVLMHCKHGSDRTGLVAAMYRVVVQGWSKEDALNEMTEGGFGDSHHFKDGVRYMMQADVDKLRVALANGDCSTSVFA LCSLESWVNSTTTTRHLDPQVVLPER
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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