Pseudomonas brassicacearum subsp. brassicacearum NFM421, PSEBR_c2g1
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas brassicacearum subsp. brassicacearum NFM421 chromosome, complete genome. [Details] | |
| DNA Sequence Upstream of Gene |
TTGAGCCAGACTTCCCAGCCCAGGCCCCAGGCGCCCAGGGTTGGCGATTCCCAGTTGTCTTCGACGAAACGAATGTCATGCACCAGCGGGTCGAGGCCCA CGTGCTTGAGCGAGCCCAGATACAGTTCCTGGAAGTTTTCCGGGTTCGGCTTCAGCACGACCTGGAACTGATAGTAGTGCTGCAGACGGTTCGGGTTTTC GCCGTAGCGGCCGTCAGTCGGGCGGCGGCTGGGCTGCACATAAGCGGCGTTCCAGGTTTCCGGGCCGATGGCACGCAGAAACGTGGCAGTGTGGAAAGTG CCGGCGCCTACTTCCATATCGTAGGGCTGAAGTACCACGCAACCTTGCTCGGCCCAGTATTGCTGGAGGGCGAGGATCAAGTCTTGGAAGGTACGCACGG CTGGCGTAGGCTGGCTCACGAAATTCACCTGTTTCTTGGGCTGCGATTTAAAGAGCGGGAGTATACCCGATTCGTTCGTGCGCACGCCCCCTGGAGCCTT
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| DNA Sequence for Gene |
>PSEBR_c2g1
ATGCCACGCTGCTTTTGGTGTTCTGACGATCCGTTGTACATGGCTTATCACGATCAGGAGTGGGGCACGCCGCTGCGCGATGCGCAGGGTTTGTTCGAGT TGCTTTTGCTCGAAGGGTTCCAGGCCGGGTTGTCCTGGATCACCGTTTTGCGCAAACGCGAGCGTTACCGGGAGGTGCTGTACGGCTTCGATGTACAGCG GGTAGCGCAGATGAGCGACGCCGAAATCGATGAACTGATGCTCGACCCCGGCATCATCCGCAACCGCCTCAAGCTCAAGGCCGCCCGCCGCAACGCCCAG GCCTGGCTGGCGCTGGAAGACCCGGTGACGTTCCTCTGGTCGTTCGTGGGCGACAAACCCATCATCAACCATTTCAAGGACCGCACCGAAGTGCCGGCCA TCACGCCCGAGGCGCTGGCGATGAGCAAAGGCCTGAAGAAAGCTGGATTTACTTTCGTCGGACCGACCATTTGTTATGCGCTGATGCAGGCCTCGGGCAT GGTCATGGACCACACCCAGGATTGCGACCGCTACGCCGAGTTGGTAAACGGCGGTTAG
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
AATAGCCGGCTCGCAACACGGCCCATACATTCAGGAGTGACCTGTGGATAAGTTGAAAGGCGCCTTGCTGGTCGGCGCTCTGCGGTTGTTTGCGCTGCTG CCCTGGCGGGCGGTGCAAGCGGTGGGCTCGGCCATTGGCTGGTTCATGTGGAAGCTGCCCAACCGCTCCCGCGACGTGGTGCGGATCAACCTCGCCAAGT GTTTTCCCGAGATGGACCCGGCCGAGCGCGAACGCCTCGTTGGCCAGAGCCTCAAGGACATCGGCAAATCCCTGACCGAAAGCGCCTGCGCCTGGATCTG GCCGGCCCAACGCTCCATCGACCTGGTGCGTGAAGTCGAAGGCCTGGAGGTGCTGAAAGAAGCGCTGGCCTCCGGCAAGGGCGTGGTCGGCATCACCAGC CATTTGGGCAACTGGGAAGTGCTCAACCACTTCTATTGCAGCCAGTGCAAACCGATCATTTTCTACCGTCCGCCCAAGCTCAAGGCGGTGGATGAATTGC
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| Amino Acid Sequence |
>DNA-3-methyladenine glycosidase I
MPRCFWCSDDPLYMAYHDQEWGTPLRDAQGLFELLLLEGFQAGLSWITVLRKRERYREVLYGFDVQRVAQMSDAEIDELMLDPGIIRNRLKLKAARRNAQ AWLALEDPVTFLWSFVGDKPIINHFKDRTEVPAITPEALAMSKGLKKAGFTFVGPTICYALMQASGMVMDHTQDCDRYAELVNGG
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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