Pseudomonas fulva 12-X, Psefu_4049
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas fulva 12-X chromosome, complete genome. [Details] | |
| DNA Sequence Upstream of Gene |
AATCCTCGAGGGCGACGACCTGGCCTTCGGCGCCGCGGTAGAAGACGATCTTTTCTCCGCAGATCTGCCGGCCCAGTGGCTTCTCGGCGATCTCGTCGGG GGTGCAGGCTACATACCAGGCATTTTTCGGGTACATGACGACCTCGGTTATTGTTGGAGTTATTGGATCCAATGGTTGGTTTTTAATCAGCCTACTGTCA AGGGCGGTTCGGAAAAATAGTTAATAAAACAAACTGTCCGATCAGCGAACGCATTCTTCACTGCCTCCCGATTATGTAAGGCCTTGAGCGGTGCGGGCTC GACGAGATCGCGGATCGGATCCAGAGCCGCGACGCGACTGGCATGGATTGAACATTGGATCCATTTCTGCAACGGTTATGACGGCTGTTCCATAAAAACA ATTCAGGACCTGCGCCGATGATTATTCGTCCATTCCCCTCGGCTGCCGCCTGCGGCAGGCCGTTCCTTGTTTATCCAGCAGTGGTCGCGGGAGGTGCGCG
|
|
| DNA Sequence for Gene |
>Psefu_4049
ATGAGCGACCTCAGGCAAGTCGTCGACCAGGGGCCGATGCGCGGCTTTCAGTGGGTCGCCATCGCCGTTTGCGTCGTGCTCAACATGATCGACGGCTTCG ATGTGCTGGTGATGGCGTTTACGGCCTCGTCGGTGGCCGCCGACTGGTCGCTGAGCGGCGCGCAACTGGGCATGCTGCTCAGCGCCGGGCTGCTCGGCAT GGCGGCCGGCTCGCTGTTCATCGCCCCCTGGGCCGATCGCATCGGCCGGCGCCCGCTGATCCTGCTCTGCCTGGTGATTTCCGGTACCGGCATGCTGCTC TCGTCACTCAGCCAGACGCCCACCCAGCTGGCACTGCTGCGCGGTCTGACCGGGCTGGGCATTGGCGGCATTCTGGCCAGCAGCAACGTGATCGCCAGTG AGTACGCCAGCAAGCGCTGGCGCGGCCTGGCGGTCAGCCTGCAATCCACCGGTTATGCCCTGGGCGCCACCTTCGGCGGCCTGCTGGCGGTGTGGCTACT GTCGCACTGGGGCTGGCGCTCGGTGTTCTTCGCCGGCGGCCTGATGACCTTCGCGGCCATCGTGCCGGTACTCCTGTGGTTGCCCGAATCCCTGGACTTC CTGCTCTCTCGGCAGCCGGCCAAGGCGCTGGAGCGGGTCAATCGCCTGGCCGCGAAACTGGGCCGGCCGAATCTGAGCGCTCTGCCGGCGTTGCCAGTCG GCGGGCATGCCAGCAGTGGCGCTTTCGCCCGGCTGTTCGACCCTGAGCAACGGCGCAGCACGCTGCTGATCTGGGTGCTGTTCTTCCTGGTGATGTTCGG CTTCTACTTCATCATGAGCTGGACGCCCAAGCTACTCACCCAGTCCGGCCTGTCGGTGCAGCAGGGCGTCACTGGCGGGGTGCTGCTGAGCATCGGTGGC ATCTTCGGCGCGACCTTGCTGGGGCTCTTGTCGGCGCGTTTTTCCCTGGCGCGGGTGCTGGCCGGCTTCATGCTGATCACCGCCGTGCTGCTGGTAGTGT TCACCGGCATTGGTTCGTCGTTCACCGCGGCGCTGGGCATGGGCTTGCTGATCGGGCTGTTCTCCAACGGCTGCGTCGCCGGGCTGTATGCGCTGTCGCC GCTGATCTACGGCGCATCGGTACGAGCGACCGGGGTGGGCTGGGCGATCGGTATCGGGCGTGGCGGGGCGATCCTGTCGCCGACCGTAGCCGGCTTCATG CTCGATGACGGCTGGCAGCCGCTGCAGCTGTACACCTGGTTCGCCCTGGTGTTCGTGGCTGCTGCGGTGCTGTTGTTGACCCTGCTGCCGGCGCAGAAGC CGCAGCAGATGACGCCGGCTCAGGCCTGA
BLASTN Search
|
DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
|
|
| DNA Sequence Downstream of Gene |
GCCGCAACGGGCGCGAGGTTGCTCCTCGCGCCCGCTCCCTCACCAGAGCGCCAGGGTGTAGTCGATGTGCAGGCGGGTCTGGTTCTCGTCGCGGAAGGCT GCGCCGGCAGCGAAGTCGTTGCGATAGATCGAGTGCCGTGCCTTCAGGCCGACGCCCTTGAATGTACCACTCTGGATCACGTAGCCGATCTCCATCTGCA GCTCACGCTCCTTGAGGCCCGCGCCACCCAGGGTTGGCAGCTCGATGTTGTCGCCACGCAGATAACGCAGGCGCGTTTTCAGACCGGGCAGGCCGGCAGC GGCGAAGTCATAGTCGTAGATCGCCTGCCAGGTACGTTCCTTTGGGTTGAGGAAGTCCGAGCTCATGGCCATCTCGCTGATCACCATCGACTCGGTGCCG GAGATGTACGGTTTGGCCGTGTCGCCGCTCTGGTGCATGTAGCCCAGGGTGAAGCGGTGGCCGTCCAGCGCATAGGCGAACTGTGCGGCGAGGTTGCGGT
|
|
| Amino Acid Sequence |
>major facilitator superfamily protein
MSDLRQVVDQGPMRGFQWVAIAVCVVLNMIDGFDVLVMAFTASSVAADWSLSGAQLGMLLSAGLLGMAAGSLFIAPWADRIGRRPLILLCLVISGTGMLL SSLSQTPTQLALLRGLTGLGIGGILASSNVIASEYASKRWRGLAVSLQSTGYALGATFGGLLAVWLLSHWGWRSVFFAGGLMTFAAIVPVLLWLPESLDF LLSRQPAKALERVNRLAAKLGRPNLSALPALPVGGHASSGAFARLFDPEQRRSTLLIWVLFFLVMFGFYFIMSWTPKLLTQSGLSVQQGVTGGVLLSIGG IFGATLLGLLSARFSLARVLAGFMLITAVLLVVFTGIGSSFTAALGMGLLIGLFSNGCVAGLYALSPLIYGASVRATGVGWAIGIGRGGAILSPTVAGFM LDDGWQPLQLYTWFALVFVAAAVLLLTLLPAQKPQQMTPAQA
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
|