Pseudomonas fulva 12-X, Psefu_3959
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas fulva 12-X chromosome, complete genome. [Details] | |
| DNA Sequence Upstream of Gene |
TCGCCGCTCGGCGGGCCAGACCAGTGGTTTTCGATCAGAGGCTTTGCATTCCGCTTGACGAGGCGGTAACATCCGCAACCCTTAAAAACCTGTGATCTTT CCGTGCCGTTGCCAGGAAGACACAAACCTCCGGTAATAAAGAAGGTAGCCCTGGATGCCAGCCGTCAAAGTTAAAGAGAACGAACCCTTCGACGTAGCTC TGCGTCGTTTCAAGCGCTCCTGCGAAAAAGCCGGTGTTCTGGCCGAAGTTCGTAGCCGCGAATTCTACGAAAAGCCGACCGCCGAGCGTAAGCGCAAAGC CGCTGCCGCTGTTAAGCGTCACGCCAAGAAAGTGCAGCGCGAGCAGCGCCGCAGCGTTCGCCTGTACTAATAGCGTACACGCAACGCCCGAATGCCCGGC TCGGCCGGGCATCATCGTCAAGAACTCCGCATCGCCAGCTGGCGAAATGGCGGAGTTTTTGCGTTTCTGCCGTTACTTATCTGGGACACCCTGAGCGTCT
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| DNA Sequence for Gene |
>Psefu_3959
ATGGCCGGCCTGATCCCGCAATCCTTCATCGATGACCTGCTCAACCGCACCGACATCGTCGACGTGGTGAGCTCACGCATCCAGCTGAAGAAGACCGGCA AGAACTACAGCGCCTGCTGTCCGTTCCACAAGGAAAAGACGCCCTCCTTCACGGTCAGCCCGGACAAGCAGTTCTACTACTGCTTCGGCTGCGGCGCCGG CGGCAACGCCCTGGGCTTCGTGATGGATCACGACCAGACGGAGTTCCCCCAGGCCGTCGAGGAGCTGGCCAAGCGCGCCGGCATGGAAGTGCCACGGGAG GACAGCGGCCGTGGCGGCAAACCGCGCCAGGCCGCCGACTCGCCACTTTACGCCCTGCTCAAGGCGGCGGCCGACTATTACCGCCAGGCCCTGAAAAGCC ATCCGCAGCGCCGCGCCGCGGTCGAATATCTGAAAGGTCGCGGCCTGTCCGGCGAGATCGCCCGGGATTTCGGCCTCGGCTTCGCTCCGCCGGGCTGGGA CAACCTGCTCAAACACCTGGCCGGCGACAGCCTGCAGCACACGGCGATGATCGATGCCGGCCTGCTGGTCGAGAACCCGGACAGCGGCAAACGCTACGAC CGCTTTCGCGACCGGGTAATCTTCCCCATTCACGACAGCCGCGGCCGGGTGATCGCCTTTGGCGGCCGCGTGCTGGGCGACGACAAGCCCAAGTACCTGA ACTCGCCCGAGACCCCGGTCTTTCACAAGGGCCAGGAACTCTACGGCCTGTATGAGGCGCGCAAGCACAACCGCAACCTCGACGAGATCATGGTGGTGGA GGGCTACATGGACGTCATCGCCCTGGCCCAGCAAGGCCTGCGCAACGCGGTGGCGACCCTGGGCACCGCCACCAGCGAGGAACACCTCAAGCGAATCTTC CGCCTGGTGCCCAGCGTGCTGTTCTGTTTCGATGGCGATCAGGCCGGGCGCAACGCAGCCTGGCGCGCCCTGGAGGCCGCCCTGCCCAACCTGCAGGACG GTCGCCGCGCGCGCTTCCTGTTCCTGCCCGACGGTGAAGACCCGGACACCCTGGTGCGCAGCGAAGGCACCGATGCCTTCCAGGCCCGCATCCATCAACA CGCCCAGCCGCTGGCCGACTACTTCTTCCAGCAACTGAGCGAAGAGGCCGACCCGCGCTCGCTGGAAGGCAAGGCACACCTGGTGACCCTGGCCGCACCG CTGATCGACAAGATTCCCGGCAACACGCTACGCGCTCTGATGCGCCAGCGCCTGACCCAGATTACCGGCCTGGATCCCAGCACCCTGGGCCAGCCGCAAG CAGCGCCGGCACGCCAGCCGAGCGCGCCGGCCCCGCAAAGCCACGACCATCACGCACCGCCCTTCGAAACCATCCCGGACAGCGCCTATTACGACGCGCC GCCAGGCTTCGAGGAGCACGCTGCGCCGACTCAGGTGTTCGAGCGCCCGGCACGCAAGCCTGGCAAGGGCGAATGGAAGAAGGATGGCGGCAAGTGGAAG AAAGGCCGCGAGGATTACCACCCGCCGCGCACCGCAGTTAGCGTCGAATCGCCGCACCTGAGCGCCCTGCGCAGCCTGTTGCATCATCCGGAGCTGGCGC AGAAGGTCGAGGATGTCAGCAACTTCGCCGCCGAAGACGACACATACGCCCAGCTACTGGTAGCGCTGGTGGGCACCCTGCAGAAGCAGCCGAACCTGCG TTCGCTGCAATTGATCGCCCGCTGGCACGGCACCGAGCAGGGCCGTTTGCTCAAGATTCTGGCAGAAAAAGAATGGCTGATCGATCAGGACAACCTTGAA CGGCAGTTTTTCGACACCATAACTACACTTGCCCGTAGCCAGTCGCTCAGGCGACGCGAAACCGCTCTGCGCAGCATCATGCAGAAAAGCCCGAGCGAAC TCACCGACGAGGAAAAGGCTCTATTGCGCGAGCATTACAGCAGCCTGAACTCGCCCAGCAAGACCCCAACTGGCGCCTGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
GCGCCGAGCTGAGGTATAATCCTCGGCTTGTTTTCAGCCCGCCAAGACCTTAAGTGGATAGGGTGTTATGTCCGGAAAAGCGCAACAGCAATCTCGTTTG AAAGAATTGATCAGCCGTGGTCGTGAGCAGGGTTACCTGACTTACGCGGAGGTCAATGACCACCTGCCGGAGGATATTTCAGATCCGGAACAGGTGGAAG ACATCATCCGCATGATCAACGACATGGGGATCAACGTATTCGAGAGTGCTCCGGATGCGGACGCCCTGTTGTTGGCCGAAGCCGACACCGACGAAGCCGC TGCCGAGGAAGCAGCCGCTGCTCTCGCGGCCGTTGAGACCGATATTGGCCGTACCACCGACCCGGTGCGCATGTACATGCGTGAAATGGGTACCGTGGAA CTGCTGACCCGCGAAGGCGAGATCGAAATCGCCAAGCGTATCGAAGAAGGTATCCGTGAAGTCATGGGCGCTGTCGCTCACTTCCCGGGCACCGTCGACA
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| Amino Acid Sequence |
>DNA primase
MAGLIPQSFIDDLLNRTDIVDVVSSRIQLKKTGKNYSACCPFHKEKTPSFTVSPDKQFYYCFGCGAGGNALGFVMDHDQTEFPQAVEELAKRAGMEVPRE DSGRGGKPRQAADSPLYALLKAAADYYRQALKSHPQRRAAVEYLKGRGLSGEIARDFGLGFAPPGWDNLLKHLAGDSLQHTAMIDAGLLVENPDSGKRYD RFRDRVIFPIHDSRGRVIAFGGRVLGDDKPKYLNSPETPVFHKGQELYGLYEARKHNRNLDEIMVVEGYMDVIALAQQGLRNAVATLGTATSEEHLKRIF RLVPSVLFCFDGDQAGRNAAWRALEAALPNLQDGRRARFLFLPDGEDPDTLVRSEGTDAFQARIHQHAQPLADYFFQQLSEEADPRSLEGKAHLVTLAAP LIDKIPGNTLRALMRQRLTQITGLDPSTLGQPQAAPARQPSAPAPQSHDHHAPPFETIPDSAYYDAPPGFEEHAAPTQVFERPARKPGKGEWKKDGGKWK KGREDYHPPRTAVSVESPHLSALRSLLHHPELAQKVEDVSNFAAEDDTYAQLLVALVGTLQKQPNLRSLQLIARWHGTEQGRLLKILAEKEWLIDQDNLE RQFFDTITTLARSQSLRRRETALRSIMQKSPSELTDEEKALLREHYSSLNSPSKTPTGA
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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