Pseudomonas fulva 12-X, Psefu_3925
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas fulva 12-X chromosome, complete genome. [Details] | |
| DNA Sequence Upstream of Gene |
GGCGTGCTGGTCGACGCCAACCTGGAGCAGCAACTGTGCCGCGGCATCTCCACCCTCAACCGCAAGCAGCTGAGTGGCGAGCCGCGCAGCAAGGACACGC CCTTCGAGCGCCTGCAAGGCAGCCTGAGCATCCGCAACGGCGTGGCAAACAACCCGGATCTGCAGGCGCGCATCCCCGGCCTGAGCGTGGCCGGCGACGG TGACGTCGACCTGCGCGTACTGGGCCTGGACTACCGCGTCGGCATCACCATCGAAGGCGATCAGCGCGAAATGCCGGACCCGGCCTGCGAGGTCAACAAG CGCTACGTCGGCATCGCCTGGCCGCTGCACTGCCGCGGCCCGCTGGAGCTGGGCGCCAAGGCCTGCCGCCTGGATCAGGAAGGCATGGGCAAGGTCGCCG CCAAGCTGGCCGGTGATCGCATCAATGAAAAACTCGAAGAGAAGCTCGGCGACAAGGTCAGCCCAGAACTTAAAGACGCACTCAAGGGCCTGTTCAAACG
|
|
| DNA Sequence for Gene |
>Psefu_3925
ATGAGCCCCGAGCAATTCTCCAGCGCCGTGCTGCGCTGGTATGACGCGCATGGCCGCAAGGATCTGCCCTGGCAGCAGAACATCACGCCCTACCGCGTGT GGGTCTCGGAGATCATGCTGCAGCAGACCCAGGTCAGCACCGTGCTCGGCTACTTCGACCGCTTCATGAGCGCCCTGCCGACCGTGCGCGACCTGGCCGA AGCGCCGGAAGACGAAGTGCTGCACCTGTGGACCGGCCTGGGCTATTACACCCGCGCCCGCAACCTGCAGAAGACCGCGCAGATCATCATGGCCGAGCAC GGCGGCGAATTCCCGCGCAGCGTCGAAGCCCTCACCGAACTGCCCGGCATCGGCCGCTCGACAGCAGGCGCTATCGCCAGCCTGAGCATGGGCCTGCGCG CACCGATTCTCGACGGCAACGTCAAACGCGTACTGGCGCGCTTCGTTGCCCAGGAAGGCTATCCGGGCGAGCCCAAGGTGGCCAAACAGCTGTGGGCCGT GGCCGAGCGCTTTCTGCCCGAAGAGCGCGTCAACCATTACACCCAGGCAATGATGGATCTGGGTGCCACGCTGTGCACGCGCAGCAAGCCCACCTGCCTG CTGTGCCCGGTGCAGAGCGGCTGCGAGGCGCATCTATTAGGCCTGGAGATCCGTTACCCGGTGGCCAAGCCGCGCAAGGAGCTGCCGCAGAAACGCACCC TGATGCCGATGCTGGTCAGCCGTGACGGCGCCGTGCTGCTTTACAGGCGGCCTTCCACCGGTCTCTGGGGCGGCTTGTGGAGCCTGCCGGAACTCGATGA CCTCGAAGCGCTGCAAGCACTCGCAGACCAGCACCAGTTGAGTCTTGGCGAACGCCGCCAACTCGATGGCTTGACTCACACTTTCAGCCACTTCCAGCTG GCCATCGATCCCTGGCTGATCGAGGCCGACGGCGTTCCCGGCTACGTGGCCGAGGCCGACTGGCTCTGGTATAACCTCGCCACCCCGCCGCGCCTGGGCC TCGCTGCCCCGGTCAAGAAGCTGCTCAAACGCGCGGCCGACGCACTGCATACAGGAGAAATGGCATGA
BLASTN Search
|
DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
|
|
| DNA Sequence Downstream of Gene |
CCCGCACCGTGATGTGCCGCAAGCACAAACAGCAACTCCCCGGCCTGGATCGCGCGCCCTACCCTGGCGCCAAGGGCGAAGACATCTTCCAGAACGTCTC CAAGCAAGCCTGGGACGAATGGCAGAAGCACCAGACCCTGCTGATCAACGAGCGCCGTCTGAACATGATGAACGCCGAAGACCGCAAATTCCTGCAGGCC GAGATGGACAAGTTCCTCTCCGGCGAGGATTACGCCAAGGCTGAAGGCTACGTGCCGCCCAGCGAATAAGCGGCCTGAGACGTAAGCGCCCGGAATATTT AAATATTTTCCAAAAAAGGTTTGACACCCCAAGGCTAAAACCGTTTAATACGCGCCGTTGCCCAGGTAGCTCAGTCGGTAGAGCAGGGGATTGAAAATCC CCGTGTCGGCGGTTCGATTCCGTCCCTGGGCACCACCTTTCGTTTTCAGGTGGTGCCAAAACCACCTGAAAAACAACAAAAAGCCCGCCTTGAGCGGGCT
|
|
| Amino Acid Sequence |
>A/G-specific adenine glycosylase
MSPEQFSSAVLRWYDAHGRKDLPWQQNITPYRVWVSEIMLQQTQVSTVLGYFDRFMSALPTVRDLAEAPEDEVLHLWTGLGYYTRARNLQKTAQIIMAEH GGEFPRSVEALTELPGIGRSTAGAIASLSMGLRAPILDGNVKRVLARFVAQEGYPGEPKVAKQLWAVAERFLPEERVNHYTQAMMDLGATLCTRSKPTCL LCPVQSGCEAHLLGLEIRYPVAKPRKELPQKRTLMPMLVSRDGAVLLYRRPSTGLWGGLWSLPELDDLEALQALADQHQLSLGERRQLDGLTHTFSHFQL AIDPWLIEADGVPGYVAEADWLWYNLATPPRLGLAAPVKKLLKRAADALHTGEMA
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
|