Strain | Pseudomonas aeruginosa strain AZPAE14917 AZPAE14917_contig_4, whole genome shotgun sequence. [Details] | |
DNA Sequence Upstream of Gene |
GGTTCCGCGCCAGCTCACCCTCGGCGCGCGACACCGCAGCCTTCAGCGGTGCCGGATCGATCTGGAACAGCAGGTCGCCAGCCTTGACGTCGGCGCCCTC CTCGAAGCGCTTCCGCACGACGATGCCGGCCACCCGCGCGCGCACCTCGGCGACCCGCACCGGTTCGATCCGCCCAGGCAGTTCCGAACTCAGCGCCAGG GGCTCGGCCTGCACCGTCAGGACCTCCACCGGCAACACCATTTCGGCGGCCTCCTGTCGCTCTTCCGCCGGCCCACAACCCGCCAACGCGATGGCCATAG CCAACGCCCCGATCCTTCCTATTGCACGCAAATCAGCCATGACACACCCGACCGTTGATTGAAAACGGACCGAATGGTACTTTTTCGAGCTAATTGAGTC AATATTGTCTCAAATGATCTTTTGACAGCTAATTCCTTTGGACGCGAGGCCAGTTTTCTGCACAATGCGCACAATCAGAAAAACCAACCGGGACCCATCG
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DNA Sequence for Gene |
>NS33_RS04230
ATGACCCTGATTTCCCATGACGAGCGACTCATCAAGGCGCTGGCAGTCGCTATCGTCGACCGCCCGCGAGCGACGCTGAAGGAACTGGCCGAGGCGGCCG GCGTAAGCAAGGCCACCCTGCACCGCTTCTGCGGCACGCGGGACAACCTGGTGCAGATGCTCGAGGACCACGGAGAGACCGTACTGAACCAGATCATCCA GGCCTGCGACCTGGAGCATGCCGAGCCTCTGGAGGCGTTGCAGCGCCTGATCAAGGAACACCTCACCCACCGCGAGCTGCTGGTATTCCTGGTATTCCAG TACCGCCCGGACTTCCTCGACCCGCACGGCGAAGGCGCACGCTGGCAGTCCTACCTGGAAGCGCTGGACGCCTTCTTCCTGCGCGGACAGCAGAAAGGCG TGTTTCGCATCGACATCACGGCGGCCGTGTTCACCGAACTGTTCATCACCCTGGTCTACGGCATGGTCGATGCGGAACGTCGCGGACGGGCGGCCAGCTC CAATTCCGCGCATACCCTGGAGCAGATGTTCCTCCATGGCGCCTCCAATCCGGCGCGCTCCTGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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DNA Sequence Downstream of Gene |
CCCTCGCACCCGCGGCGGCGCCCCTCTCGTCGCCGCATGGCACGGACCGATCCGCGTGCCGTCGACTTCGGCCGCCCGGAGGCCTGCTCGACACTCGGGA AGATCAGTCCTCACCGGCCCTGCGACAAAGTGCCTCGACAGCCGGAAAGGACCGTGACGCTCGTCGGCGATACTGGCACTTGGCCTTGCTTCCGGGCATC CTAACTGTCTACCGAATCACACCTCCCCCAGGAATTCCGGTCAGTGTCGACCCCCTCGCTAACCCCGTCGCCGCCTCCCGCCGGCGACCCACTGACCGTA CCCGACCGACCGGCAGCCAAGGCTGGCCTGCTGTTGCTGGTCCTGTTGATGCTCGGCCTGCTGCTCTGGCAGATGAGCCAGGAGCTGCGCCAGCAGGAAC GCTTCGAACACGAGCGAGCCGCGGCCCAGCTCGATCGTCTCAACGACCGCCTGTCCCTGACCCTCGAACTCAAGGCGCGCACCGCCCTCGCCCTGCTCCC
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Amino Acid Sequence |
>transcriptional regulator
MTLISHDERLIKALAVAIVDRPRATLKELAEAAGVSKATLHRFCGTRDNLVQMLEDHGETVLNQIIQACDLEHAEPLEALQRLIKEHLTHRELLVFLVFQ YRPDFLDPHGEGARWQSYLEALDAFFLRGQQKGVFRIDITAAVFTELFITLVYGMVDAERRGRAASSNSAHTLEQMFLHGASNPARS
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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