Pseudomonas fulva 12-X, Psefu_3762
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Gene Ontology
| Ontology | Accession | Term | GO Evidence | Evidence Ontology (ECO) Code | Reference | Comments |
|---|
Functional Classifications Manually Assigned by PseudoCAP
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Functional Predictions from Interpro
| Analysis | Accession | Description | Interpro Accession | Interpro Description | Amino Acid Start | Amino Acid Stop | E-value |
|---|---|---|---|---|---|---|---|
| SMART | SM00267 | duf1_3 | IPR000160 | GGDEF domain | 332 | 508 | 3.4E-55 |
| Gene3D | G3DSA:3.30.450.20 | PAS domain | - | - | 36 | 185 | 1.7E-31 |
| CDD | cd12914 | PDC1_DGC_like | - | - | 64 | 185 | 1.32662E-20 |
| Gene3D | G3DSA:3.30.70.270 | - | IPR043128 | Reverse transcriptase/Diguanylate cyclase domain | 329 | 509 | 5.8E-56 |
| Pfam | PF02743 | Cache domain | IPR033479 | Double Cache domain 1 | 47 | 230 | 1.8E-16 |
| PANTHER | PTHR45138 | REGULATORY COMPONENTS OF SENSORY TRANSDUCTION SYSTEM | - | - | 88 | 509 | 3.2E-66 |
| CDD | cd12915 | PDC2_DGC_like | - | - | 189 | 286 | 2.76894E-18 |
| NCBIfam | TIGR00254 | JCVI: diguanylate cyclase (GGDEF) domain | IPR000160 | GGDEF domain | 339 | 508 | 5.8E-49 |
| SUPERFAMILY | SSF55073 | Nucleotide cyclase | IPR029787 | Nucleotide cyclase | 348 | 507 | 6.36E-44 |
| FunFam | G3DSA:3.30.70.270:FF:000001 | Diguanylate cyclase domain protein | - | - | 338 | 509 | 8.1E-51 |
| Coils | Coil | Coil | - | - | 39 | 59 | - |
| Gene3D | G3DSA:3.30.450.20 | PAS domain | - | - | 188 | 277 | 1.5E-17 |
| CDD | cd01949 | GGDEF | IPR000160 | GGDEF domain | 346 | 505 | 3.62881E-46 |
| Pfam | PF00990 | Diguanylate cyclase, GGDEF domain | IPR000160 | GGDEF domain | 346 | 504 | 5.3E-44 |
Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.