Strain | Pseudomonas fulva 12-X chromosome, complete genome. [Details] | |
DNA Sequence Upstream of Gene |
CGAAGGTCTGGACATGCGCTACTACAACGTCATCTACGACATCATCGAGGACGTCAAGAAGGCGCTCACCGGTATGCTCGGCAGCGACGTTCGCGAGAAC ATCCTCGGCATCGCCGAAGTGCGCGACGTGTTCCGTTCGCCGAAGTTCGGTGCGGTCGCCGGTTGTATGGTGGTCGAGGGGACGGTCTACCGTAACCGTC CGATCCGCGTACTGCGCGACGACGTGGTGATCTTCGAAGGCGAGCTGGAGTCCCTGCGTCGCTTCAAGGACGATATGGCCGAAGTGCGTAACGGCATGGA GTGCGGTATCGCCGTGAAGAGCTACAACGACGTCAAGGTCGGCGACAAGATCGAAGTGTTCGAGAAAGTCCAGGTGGCTCGCAGCCTGTAATCGCGAGTC GCAACACGCAACGCCCGGCCCCGCATATGCGCGGCCGGGCGTTTGCCGCTTTTGAGTCCGCTGCTTTTGCAGGCGGCGAGACGAGTGGAAGGTAGCAACG
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DNA Sequence for Gene |
>Psefu_3583
ATGGCAAAAGACTACAGCCGTGCCCAGCGTATCGGCGACCAGATTCAACGCGAATTGGCGCAGCTGATTCGTACCGAAGTCAAAGACCCGCGCCTGGGTG GCCTGGTCACCGTTACCGCGGTCGATGTCAGCCGTGACGCCAGCCATGCCAAGGTGTTCGTCACCGTCATGGGCGCCGAGCCGCAAGAAGGCAGCGATCC CATTGCGCAGAGCCTCAAAGTGCTCAACGACGCCAGTGGCTTCCTGCGCATGCAGCTGGGCAAGGCTATGAAGCTGCGCAGCGTGCCGCACCTGCGTTTC CATTACGACGAAAGCATCGTGCGTGGTGCCCAGTTGTCGGCGCTGATCGAGCGCGCGGTGACCGAGGACAGCAAGCACGTCGACAGCGACACCGAGGCCA AGGAGTAA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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DNA Sequence Downstream of Gene |
GCACGTGGCCCAGGTTAAGCGTATTCGTCGCAAGGTCGACGGCATCATCCTGCTCGACAAGCCCAAGGGCTTCAGTTCCAACGCGGCGCTGCAGAAGGTG CGCTGGTTACTCAATGCCGAGAAGGCCGGGCACACCGGCAGCCTCGATCCGCTGGCCACCGGCGTGCTGCCGCTGTGCTTCGGCGAGGCGACCAAGTTCT CCCAGTACCTGCTAGATGCCGACAAGGGTTATGAGACGGTCATGCAGCTCGGCGTCACTACCACCACGGCCGATGCCGAGGGTGAGGTGATCGAGCGCCG CGAAGTGGATGTCGATGCCTCGGACATCGAGGCGCTGCTGCCGCAGTTTCGTGGCGACATCAGCCAGGTGCCGCCGATGTATTCGGCGCTCAAGCGCGAT GGCCAGCCACTGTACAAACTCGCCCGGGCAGGAGAAGTAGTGGAGCGCGAGGCGCGTTCTGTTACTATTGCGCGCCTGGAGTTGCTCAGCTGTGCTGCCG
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Amino Acid Sequence |
>ribosome-binding factor A
MAKDYSRAQRIGDQIQRELAQLIRTEVKDPRLGGLVTVTAVDVSRDASHAKVFVTVMGAEPQEGSDPIAQSLKVLNDASGFLRMQLGKAMKLRSVPHLRF HYDESIVRGAQLSALIERAVTEDSKHVDSDTEAKE
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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