Pseudomonas aeruginosa AZPAE14917, NS33_RS10735
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas aeruginosa strain AZPAE14917 AZPAE14917_contig_10, whole genome shotgun sequence. [Details] | |
| DNA Sequence Upstream of Gene |
CGTGTCGCCCCGCTTTAGATTGGCGAGAAGCGCGGCCAGGCCGATTCGATCGGCCTTGGCGCCGCTGGCAGTGTCTTCGAACACTCGCTCGCAACCCGCC TTGGCCATCGCATCGCGTTGCAGGTCCAGTAGTTGATCGTCGGTGGAAATGCGCACGTACCCAATCAGTATGATTTCGTCCAGAAATGCGCGAAAGGCAG CATAGGTGAATTTTGAAAGCGAGAAATCGTTACTGGACTAAAAGTACGCGGCTTCTGGGGGCGGCCAAGGGGAACGAGGCTGGCGTCCAGAAAACGGTCG TCTGATGGACGCTTCCACGAACGGAGCGATACCGCAAAGGGAAGAATGGAGTGCAACCATCGTAGAGCTTCAAACTGAGATATTGCAGTTGATTGCCGCA TCTGGCCGGCCTATTGCCGTGCATTTTCTACCCACTACTGCATCGCTCAAGAAGGTTCTGTAAATATATTGGTTCAACTCTTTCGATAGGAAAGCCATTC
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| DNA Sequence for Gene |
>NS33_RS10735
ATGACAAATAATAGTGCGCCACCACTTGTCGTGACCAGAGGAAATGATAATGGTTACGAGCCTGGGTCGATGGTTATTACGCATGTACAGGCTAGTGGGC TAGACATAATCCAGTACATTCCAGGTCGGTCAAGCTACGGTACTCCACCATTTGTCCCGCCAGGACCAAGCCCGTATGTTGGCCCTGGAATGCAAGAGTA CAGGAGGCTAAGAGATACTCTTGATAAGTCCCATTCAGAACTCAAGAAAAACCTGAAGAATAAAACCTTGAAGGAGGTAGATGAACTCAAGAGTGAAGCG GGGTTGCCAGTTAAAGCGGTCAGTGCCAATGACATTCGCGATGAAAAGAGTATCGTTGATGCACTCATGGATGCCAAAGCAAAATCGCTAAAGGCCATTG AGGATCGCCCGGCCAATCTTTATACGGCTTCAGACTTTCCTCAGAAGTCAGAGGCGATGTACCAGAATCAGTTGCTAGCCAGTCGAAAGTTCTATGGAGA GTTCCTTGATCGACATATGAGTGAGCTGGCCAAAGCGTACAGCGCTGATATCTATAAGGCGCAAATCGCTATCTTGAAACAAACGTCTCAAGAACTGGAG AGTAAAGCCCGGTCAATGGAGGCGCAAGCCCAGCAGGTCACTCAACAGCTCGGTGCCGACTTCAACGCGATCACCACTCCGACCGCCACCAAGGTCCAGC AACGTGTGAAAGCAGTGGATGCTAGTCTGTCTCAGGTTTCCACCCAGGTCAGTGGTGCAGTCGCCTCGGCAACCCAGGCGGTGCAGGTCAAGACAGCGCA AGCCCAGCAACAAGCCAACAGCCAGATTTCGTCCAGCCAGAACCTGATCAGCGCGGCATTTCGGAATCAGATTGCCTTGGCAGCACAGGCCAGTGGAGAA GCCCAGGTCACGGCTTTCAACACCAAAGTCAAGCAGATCGTCAACGAAGCCACGGCGTTTTCGACAGCACGAAAACAAGCGCTGGCTCAGTTTGCTGCCA ATGCGGCCGCCGAGGTCGAAACCGAGGTCAACAGGCTAACCGCCCAGGTCAAGGCCAGCCCCACCAAGGCGGCTTCGCAAGCTGCACAAGCAACCCTTCG ACAATTCACTGAAAGCACCTATGCCAAGGTGAACACCTATGCCCAGCAGACCGAAGCAGCGCTGCAGGCCAAAGCCAAGGAGGTTTCGGCAGCGGTAGCC GAGGCACAGCGTGCGGCGACCAACGATTTGCAAAAAACAGCCGATGTAGTACCAGGTCAGATCATTCAGGCTGCGAACACCTTGGCGATGCCGGCTACCT CTACGCCGCTGGTTTCGGTGGCCGGGTTTGGTAGTGCGGCAGTGGAGACGGCTCGCCTGGCGGCTTCCCTAACGAATGCTGTCAATCGCCTGGTTCAGAT TGCTGGTAGTGGACCCGGCGCATACTTTGCCACCTTCGCGGTGCTGTCGCTGTATTCCGACCAGGCTGGTAAAGACAGTGACAAGGTTCCTGCCGGCGTT CGCAATGCATTGGCACTGGAGGCGTCCGCTCTGGGGCTTCCTGGCACGGCTGATTTGCAAAGCGTCGCCAAGGCAGGTGGCACGGTTGATATGCCGGTAC GACTCACGAGTGCTGCACAAGAGAGCCCGAGTGGTAAATCGCAGATTGCCGCGATGTTGACCAACGGTGCAACTGTCCCCAAGGGCGTGCCTGTTCGCGC CGCGACCCTCAATGCTGCGACGGGCCGGTATGAGGTGACGGTTCCCGCAAAGTCCACCGTGCCGAATACACCACCGCTGATCTTGACCTGGACCCCTGCC ACCCCTCCAGGAAGCCAGAACCCCTCAAGCACCACTCCGGTCGTACCGCAGCCGGTTCCGGTGTATGAGGGAGCAACGATCACCCCAGTACAGGCCGAGC CGGAGTCCTATCCGGGAGTGCCGTTAGATCTGGACGATCTGATCGTGATCTTCCCGGTGGGCTCGGGGGTTAAGCCAATCTATATAATGTTCAATCATAA CCCTCATGATGTTGTTATTGATGATAAGATCAGAGAGCAAATTCCAATTAGAGGGTGGACTGAGGTTGAAATTAGAGATGTTATCGGAAAAGGTGCAACA GGTAGTTCTTCAGATAAGCGTCGGCCTAATAAGACGATAGATGGGCTGGGGCGGAATGACTCTGCAACAGTATATGGAAGTCCTCCTAATGGATATATAG TTGTGAACGATAGGACAGGTGAAATTATTCAAATTGCAGATCGGAACGATTCCGCATGGGCGGTTGACGGGCGAATCATCTGGAGAAATAAGTAA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
TGATCAATCCTAACTCTGTCGAAATAGTTGACAATGGCCTAGATTTTTTTTCAAAAGAAGGCAATGGGAAGATGTGGCTAACTACGAAGGCAACTCTGGA AGTCGTATCTTTGGCAACTAAAAAAGGGTTGGCAATTTCAAAAATTGAGGGATTCATCTGGCATAAGGATGTAGGGAGGTTCGAGGCAAGACTTGATGCC ATATTTGAAGGGCTTGTCAATCCAGTAAAAGTGCCTGATGATGTCAATAATAATAACACTAGAGCGAAAGAGAGTACAGAGGAAGATGCTTCTCTTGGGC ATGATGCTTTTATTGTAACAATTGCCTCCAGAAAATAAAGGTGGAAACCTTGGGGCTGAGTTGGCTTGCAATCCCTTGCATGGACTACAAACAATATAGG CTCAGCCCCCTTAGGGATGGTCTGAAGTAGCCATGTCTTTCTGGCCGACTTCAGCCCCCGGCGAATTTGAAAGCGGAGAATCGATTAAAAACGATCCGAT
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| Amino Acid Sequence |
>pyocin protein
MTNNSAPPLVVTRGNDNGYEPGSMVITHVQASGLDIIQYIPGRSSYGTPPFVPPGPSPYVGPGMQEYRRLRDTLDKSHSELKKNLKNKTLKEVDELKSEA GLPVKAVSANDIRDEKSIVDALMDAKAKSLKAIEDRPANLYTASDFPQKSEAMYQNQLLASRKFYGEFLDRHMSELAKAYSADIYKAQIAILKQTSQELE SKARSMEAQAQQVTQQLGADFNAITTPTATKVQQRVKAVDASLSQVSTQVSGAVASATQAVQVKTAQAQQQANSQISSSQNLISAAFRNQIALAAQASGE AQVTAFNTKVKQIVNEATAFSTARKQALAQFAANAAAEVETEVNRLTAQVKASPTKAASQAAQATLRQFTESTYAKVNTYAQQTEAALQAKAKEVSAAVA EAQRAATNDLQKTADVVPGQIIQAANTLAMPATSTPLVSVAGFGSAAVETARLAASLTNAVNRLVQIAGSGPGAYFATFAVLSLYSDQAGKDSDKVPAGV RNALALEASALGLPGTADLQSVAKAGGTVDMPVRLTSAAQESPSGKSQIAAMLTNGATVPKGVPVRAATLNAATGRYEVTVPAKSTVPNTPPLILTWTPA TPPGSQNPSSTTPVVPQPVPVYEGATITPVQAEPESYPGVPLDLDDLIVIFPVGSGVKPIYIMFNHNPHDVVIDDKIREQIPIRGWTEVEIRDVIGKGAT GSSSDKRRPNKTIDGLGRNDSATVYGSPPNGYIVVNDRTGEIIQIADRNDSAWAVDGRIIWRNK
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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