Strain | Pseudomonas fulva 12-X chromosome, complete genome. [Details] | |
DNA Sequence Upstream of Gene |
TGGATGTCATGCAGCTGGTCACAACGCTGTGTGGCGAGCTGGCCACGGCTGATGAGCCGCTACCGGTCAGCGGTCGCGCTCCGCCGATACCTGGCAACCC GCTGTTGCTGCTGCGTTGCCTGCAGAATCTGCTGGAGAATGCCTTGCGTTATGCTCGGGCGATCGGGGTGGTGGTGACCCGGAAAGAGCAGGGCGTCGCC ATCCGCATTGTGGATCGCGGGCCGGGCATCGAGCCGGCGCTGCTGGAACGCATCACCGAGCCCTTCGTGCGCGGGGAGACCTCGCGCAATGCGCGCTCCG GCGGCTACGGGCTCGGCCTGAGTATCGCCAGCCGCATCGCCCTGGCCCACGGTGGCACGCTCAACCTGGAGAACCGAGAGGGAGGCGGCCTGACCGTCGA GCTGTGGCTGCCCGCCGGCAATGGGTGAAAAGCTTCGGGCACTCCGCGGCGTTTTCGGCCACTAACTCAGAACCCTATCGCCACAAGCAAGGAGTTCATG
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DNA Sequence for Gene |
>Psefu_3284
ATGAAAGTACTGATGGTGCTGACTTCCCACGACCAGCTCGGCAATACCGGCGCGAAAACCGGCTTCTGGCTCGAGGAGTTCGCCGCGCCTTATTACGTGT TCAAGGATGCCGGCGCCACGATCACCCTGGCCTCGCCAGCCGGTGGCCAGCCGCCGCTGGACCCGAAGAGTGACGCGCCCGACGCGCAAACCGACGCCAC CCGCCGCTTCAAGGCCGATGCCGAGGCGCAGCGTCAGCTGGCCAGCACCGTGAAGCTCGCCTCGGTCAACCAGCAGGACTTCGACACCGTGTTCTACCCG GGCGGCCACGGCCCGCTGTGGGACCTGGCCGAGTCCCGCGAGTCCATCGCCCTGATCGAAGCCTTCGAGCGCGCCGGCAAGCCCATCGGCTTCGTCTGTC ACGCGCCGGGCGCGCTGCGCCACGTCAAGGCTGCCGATGGCAGCCCGTTGATCAAGGGCCGTCGGGTCACCGGTTTCAGCAACAGCGAAGAAGCCGGCGT GCAGCTGACCGACGTGGTGCCGTTTCTGATCGAAGACGAGTTCCAGAAGCTCGGCGGCCAGTATGAAAAAGGTCAGGACTGGAGCTCGTTCGTGATCGAG GACGGCAAGCTGGTCACCGGCCAGAACCCGGCCAGCTCGGAAGCTGCTGCCGAGGCGCTGCTGGCAAAGCTCAAGTAA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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DNA Sequence Downstream of Gene |
GTCTCGGCACGACTATGGCGCCACTTGCCGCGCCGTAGGCAGAGCGGCTGAAGCGGTCCAGATGGAAGGGCATGAAGGTGATTATTCAATGCAATTGTGA GTGAATCGCAGTTGGATTATGATCGCGACCCCTCCCATCTGGACCGTCTTTTCATGCGCTGGAGTCGTGCTTCAATCTGCCTGTTGTCCCTGTGTTCCGT CGGCGTTCACGCCGCTTCGCTGACCGTGCCGGAAGAAGGCGCGCTGGAACTGCCCGACTCCGTCGTGACCGGCAGCGCAGAAAGCGCGACCGGCCCGGTG CAAGGCTATGCGGCGACGCGCTCGGCCAGCGCCACGCGCACCGATACCGCCCTGCATGAAACGCCCCAGTCGGTCAGCGTGGTGCCGCGCGACGTGATCG ACGATATCTCCGCCACCCGCCTGCAGCAGGCGCTGGACCAGGCCGGCGGCGTTGGCCGCGCCAACAACTTCGGTGGCCAGGGTCTCACCAATTTCACGGT
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Amino Acid Sequence |
>ThiJ/PfpI domain-containing protein
MKVLMVLTSHDQLGNTGAKTGFWLEEFAAPYYVFKDAGATITLASPAGGQPPLDPKSDAPDAQTDATRRFKADAEAQRQLASTVKLASVNQQDFDTVFYP GGHGPLWDLAESRESIALIEAFERAGKPIGFVCHAPGALRHVKAADGSPLIKGRRVTGFSNSEEAGVQLTDVVPFLIEDEFQKLGGQYEKGQDWSSFVIE DGKLVTGQNPASSEAAAEALLAKLK
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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