Pseudomonas fulva 12-X, Psefu_3265
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas fulva 12-X chromosome, complete genome. [Details] | |
| DNA Sequence Upstream of Gene |
GGCGCCCCCGAGGCCGACCAGCTCAAGGCCGTGAACCGCTTCTTCAATCTGCAAGTACGCTTTCGTGACGACCAGCAAGTCTGGGGCGTTGCCGACTATT GGGCGACGCCCGTGGAAGCACTGATGCGCGGCGCTGGCGATTGCGAGGATTTTGCCATCGCCAAGTATTTCAGCCTGCGCGAGCTGGGCGTACCGCCGGA GAAGCTGCGCATCACCTACGTCAAGGCCGTACGCCTGAACCAGGCGCACATGGTGCTGACCTATTACCCGACCCCCACCTCGGTACCATTGGTACTGGAC AACCTGATCGATGCCATCGAACCGGCGACCGAGCGCCGTGACCTGGTGCCCGTGTACGCCTTCAACGCCGAAGGGCTGTGGGTGCCCGGGCCGGCAGGCG GCAAGCAGGTGGGAGACAGCAAGCGCCTTTCGCGCTGGCAGGATTTGTTGAAGAAGATGCGCGCCGAAGGGTTCCCCTAAGGCGTAGCGAGGAGTTGTGC
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| DNA Sequence for Gene |
>Psefu_3265
ATGTCACTGTTCAAGCAGTTGTGTGTCGCCATCTGCGTGCTGATGCTGGTGAGTTTCGCCGGCAGCGTCGTGGTCAACGTGGAGAGCTCGCGCGAGCAGC AGGTCAACCAGTTGCGCTCCCATGCGCAGGACGCCGCGACGGCGCTTGGCCTGTCGCTCGGCTCGCACCTGGACGACCCGGCGATGCTGGAGCTGATGGT CAGCTCGATCTTCGACAGTGGCTATTTCGAGAGCATCCGCGTGATCGGCCCGGACGACAAGGTGCTGGTCGAGCGCTCCGGCCCGAACCTGGGCCGCGGC GCGCCGCAGTGGTTCGCCGACCTGGTGGACCTGGAGGCTGCCCAGGGCGACGCCATCGTCAGTGATGGCTGGAACCAGGCGGCTCACGTCGAGGTGGTCA GCCATCCGTATTTCGCCATCGCCAAGCTGTGGCAGACCGCCTATGCGACCTTCCTGTGGCTGGCGCTGATCAGCCTGGTTTGCATAGGCCTGGGTGTGCT GCTGCTCAAGCGGCAGCTTCGCCCGCTGGAGTATATGGTCGAGCAGTCCAACGCCATTGCCCGTCGTGAATTTCTCAGTGCCTCGAAGCTACCGCGCACA CCGGAGTTTCGCCGGGTGGTGGCCGCCATGAATCAGATGGTGGAGAAGCTCAAGACGCTGTTCGACGAGGAAGCCTCGCGCAGTGAGAAACTGCACGCCG AGGCCTACCAGGACAGCCTCACCGGGCTGGCCAACCGCCGTTATTTCGACCTCGACCTGCAGGCCCGCCTGACGGGCGAGGAGCGCGCCAGTAGCGGTGT GCTGATGCTGTTGCGGGTCAATGACCTGGCCGGGCTGAACCAGCGTATCGGTGGGCAGCGCACCGACCAGTTGCTCAAGGCGGTGGCCGAACAGCTGCAG CAGGTCAGCCAGGGTCGTTTCCTGCTGGCGCGCAACCGCGGCGGCGAATTTGCCTTGCTGGCCGCCGGCGTCGACCGCCAGGAGGCCGAACAACTGGCCG AGCAGTTGAGCAACGCCTTGCTGTCGTTGCAGCAGACCGGTGCCAGCGACTGCTCACCTGTTGCGCATATCGGCATCACCAGCTTCGCGCCGGGAGCCAG CAGCAGCGAGCTTTACAGCGCACTGGACGCCGCCTTGGCAGAGGCCGTAAGCAATAGCCGCAGCCCATGGGCGTTCGTCGAGCATCGCCCGCAGGCCACT GCCACCGGCGAGCGCAACGACTGGCATCGCTTGCTGGACGGTGCACTGCAGCAGGGCCGTTTCCTGCAGTACGTGCAGCCGGTGGTCAATGCCGCCGAGC CGACCCAGGTTCTGCATCACAAGGTGCTGGCGCGGCTGCTCGACGAGCGTGGTGAAACCATTCCCGCCGGCCAGTTCCTGCCGTGGCTGGAGCGCTTTGG CTGGACTGCGCGCCTGGATCTGGTGATGCTCGACGCCCTGCTGGCGCAGCTTGCCAGCCATGACGGCAAGCTGGCGCTGAGCTTGTCCGGCAGCAGCGTG CGGGATGCGCAGGTGCTGGAGCAGATCTACGAGCGTTTGCGTCTGCACCCAGCCGTCATTGGCCGGCTGATCCTGGAGCTGGACGAAGGCCAGTTGCCTG GGCCTGCCGAGCTCGAGGCGATCACCCGCAAGCTGCGCAGCCTGGGTGTCGAGCTGGGTCTGCAGCATTTCGGTGGGCGCTTCAGCATGATCGGCAACCT GGCCAAGCTGGGCCTGGCCTACCTGAAGGTCGACGGCAGCTTTATCCGTGGCATCGATCAGGAGGGCGACAAGCGCCTGTTCATCGAGGCCATGCAGCGG GCAGCCAACAGCATCGATCTGCCATTGATCGCCGAGCGGGTGGAAACCCGTGGTGAGTGGCAAGTGCTGCAGGAGATGGGCGTCAGCGGGGTACAGGGGC GCCTGTTCAGCGAACCGGCGGCGTGGGCCTGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
TCAGATCAGGCCGCGCTCTTCGTCGTTGATCAAACGGTTCATGCCGCCGAGTGCATCGCGCGCTCGGCTACGGCCCATCAGCTTGCTCTGGGCTGCCTCT GGCAGGTCGGTGATGCGTACCACGCCTTTCTTGATCAGCACGTCGATCAAGTCCTCGAGTACGCGGATCATGTCCAGATCGCTCTGCTTGAGTTGCAGCA GGCTGCTTTCCACGTTCTGGTTGGAAAACCAGGCCCGCGCCTCTTCACTATCGGCCGTCAGCTCGCCGTTCATTCCCTCGAAAGGCTCGGGCTGCACGCG CAGCAGTTCGCCTTCGGCATTACGTTTTATATAGAACACGGCCTTCTCCGATAAACCTGTCTGCTACAGCTTAGCGCCCCGCCACGAAAGTGTGGCGGGG CATCGGCCTATCAAGGGTCGACTTTGATGGTGTGGTTGGCGATCAGCGTGTTGATGTCGTAGCTCGGCAGGCTGGCCTGGCCGAGGTCGATCTGCACATC
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| Amino Acid Sequence |
>diguanylate cyclase/phosphodiesterase with extracellular sensor
MSLFKQLCVAICVLMLVSFAGSVVVNVESSREQQVNQLRSHAQDAATALGLSLGSHLDDPAMLELMVSSIFDSGYFESIRVIGPDDKVLVERSGPNLGRG APQWFADLVDLEAAQGDAIVSDGWNQAAHVEVVSHPYFAIAKLWQTAYATFLWLALISLVCIGLGVLLLKRQLRPLEYMVEQSNAIARREFLSASKLPRT PEFRRVVAAMNQMVEKLKTLFDEEASRSEKLHAEAYQDSLTGLANRRYFDLDLQARLTGEERASSGVLMLLRVNDLAGLNQRIGGQRTDQLLKAVAEQLQ QVSQGRFLLARNRGGEFALLAAGVDRQEAEQLAEQLSNALLSLQQTGASDCSPVAHIGITSFAPGASSSELYSALDAALAEAVSNSRSPWAFVEHRPQAT ATGERNDWHRLLDGALQQGRFLQYVQPVVNAAEPTQVLHHKVLARLLDERGETIPAGQFLPWLERFGWTARLDLVMLDALLAQLASHDGKLALSLSGSSV RDAQVLEQIYERLRLHPAVIGRLILELDEGQLPGPAELEAITRKLRSLGVELGLQHFGGRFSMIGNLAKLGLAYLKVDGSFIRGIDQEGDKRLFIEAMQR AANSIDLPLIAERVETRGEWQVLQEMGVSGVQGRLFSEPAAWA
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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