Strain | Pseudomonas fulva 12-X chromosome, complete genome. [Details] | |
DNA Sequence Upstream of Gene |
GGGGCTCCAAGCGTACCGGGCCAGACCTGGCCAGGGTCGGCGGCCGCTACTCGGACGAGTGGCACCGCGCGCATCTCTACAACCCGCGCAACGTGGTGCC GGAATCGAAGATGCCGTCCTACCCCTGGCTGGTCGAGAACGTGCTCGACGGCAAGGACACGCCCAAAAAGCTCAAGGCCATGCAATTTCTCGGCGTGCCC TACACGGATGACGACATCGCCGGTGCCAGCGCTGCGGTGAAAGGCAAGACCGAGATGGACGCCCTGGTCGCCTACCTGCAAGTGCTCGGCACTGCGCTGA AGAACAAGAGGTGATCCCATGCTTACCGACCTGATCGACATCGGCATGGTGCGCGGCATCGGTACCGCCCTGGTACTGATCGCCTTCACCTGCGTGACGC TGTGGGCTTACAGCGGCAAGCGCGCCAAGGCCTTCGAGGATGCGGCGAACCTGCCCTTCGCCGATGAACCCAACAAAGCAGCAGTAAGGAAAGACACCCC
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DNA Sequence for Gene |
>Psefu_2865
ATGAGCACTTTCTGGAGCTGGTATATCACGCTGCTGACCCTCGGCAGCCTGGTCGCGTTGTTCTGGCTGCTGTTCGCCACACGCAAGGGGGAACGCAAGA ACACCACCGACCAGACCATGGGCCATTCCTTCGACGGCATCGAGGAGTACGACAACCCGCTGCCGCGCTGGTGGTTCATGCTGTTTCTCGGCACGCTGAT CTTCGCCGCCGGTTACCTGGCGCTGTATCCGGGGCTGGGCAACTTCAAAGGGCTGCTACCCGGCTATGAAGACGGCTGGACCCAGGTCGCCCAGTGGGAG CGCGAAGTGGCCAAGGCCGACGCCCAGTACGGGCCGATCTTCGCCAAGTACTCGGCCATGCCCCTGGAGCAGGTCGCCCAGGACGAACAGGCGCTGAAGA TGGGCGGCCGGCTGTTCGCCACCTACTGCTCGATCTGCCACGGCTCGGACGCCAAGGGCGCGGTGGGATTTCCCAACCTGACCGACGAGAACTGGCGCTG GGGCGGCGACGCCGAAACCATCAAGACCACCATCCTCAACGGGCGTATCGGCGTGATGCCGGCCTGGGGCCAGGTACTCGGTGACGACGGCGTACGCAAC GTCGCCGGCTACGTGCGCCATGAACTGGCGGGCCTGCCGCTGGCCGAGGGCAGCAATATCGACCTGGAACAGGGCAAACAGCTGTTCTCCACCACCTGCG TGGCCTGCCACGGCCCGGCAGGCACCGGCACGGCGGCCATGGGCGCACCGGACCTGACTCACCCGGGTGGCTGGATCTACGGCTCGAGCCTGGCGCAACT GCAGCAGACCATCCGCTATGGCCGCAACGGCCAGATGCCGGCCCAGGAGCACTACCTGGGCAACGACAAGGTGCACCTGCTGGCGGCTTATGTGCTGAGC CTGAGTCGCACCAAGGACGCTGCCAAATAA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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DNA Sequence Downstream of Gene |
CCCCGTCACCTACCGCGCCGTAGCCTGGCGTTGAGCGAAGCAATACCCAGGGATCGATTCCCGGGTTTCGCTTCGCTCTACCCAGGCTACAAAAGCCGAT CATTGATTCCGTAGCCTGGCGTTGAGCGCAGCGAAACCCAGGAAACCATCCCCAATCCCCCGCTTGCCCGAGCACTGTCCGCGCCAGCCAAGGCTGCTGA CAGAACCCTTGCACCACATTTCCCACGCATTGCGCCGCCCCAGCCGGTCGGGGATACTCGCGCCGCCTGAAATGCCTGTTGCCTCGCGGCAGCGCCCAGC CCAGCGTGGAACCCAGCATGAGCCCAGCAAGCAGTCCGGCTGCCTACAACTACAAGGTGGTGCGCCAGTTCGCGGTGATGACCGTGGTCTGGGGCGTGGT CGGCATGGCGCTGGGGGTGTTCATCGCCGCGCAACTGGTATGGCCGCAACTGAATTTCGACCTGCCCTGGACCAGCTTCGGCCGCCTGCGGCCGCTGCAC
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Amino Acid Sequence |
>cytochrome c oxidase, cbb3-type subunit III
MSTFWSWYITLLTLGSLVALFWLLFATRKGERKNTTDQTMGHSFDGIEEYDNPLPRWWFMLFLGTLIFAAGYLALYPGLGNFKGLLPGYEDGWTQVAQWE REVAKADAQYGPIFAKYSAMPLEQVAQDEQALKMGGRLFATYCSICHGSDAKGAVGFPNLTDENWRWGGDAETIKTTILNGRIGVMPAWGQVLGDDGVRN VAGYVRHELAGLPLAEGSNIDLEQGKQLFSTTCVACHGPAGTGTAAMGAPDLTHPGGWIYGSSLAQLQQTIRYGRNGQMPAQEHYLGNDKVHLLAAYVLS LSRTKDAAK
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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