Pseudomonas fulva 12-X, Psefu_2580
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas fulva 12-X chromosome, complete genome. [Details] | |
| DNA Sequence Upstream of Gene |
CCGGCATGAAGCTCTGGTTGTTGCGCCACGGCCAGGCCCAGGCCGAGGCGCGTAGCGATGCGGCCCGTGAGCTGACGGCCCATGGCCGTGAAGAAGTGCG CCAGTCCCTCGAGCACCTGCGTGGTCGTGCGCCAGCCATTCTGGTCAGCCCCTACGTGCGAGCACAACAGACGGCTGCGCTGGTGTACGAGGCTTTGGCC TTGCAGGCGCCGCTGCAGACCGTGCCCTGGCTGACGCCGGACAGTGACCCGCGTGACAGCCTGGCCAGGCTGCAGCAGTTGTCCGTAACTGAGTTGCTGC TGGTTTCTCACCAGCCCTTCATCGGCGCCCTGGGTGGCTTGCTGGTGCATGGCCATCGTCAGCAACCACTGGCCATGCATACGGCCAGCCTGGCGCTGCT CGAAGGCGAGGACCTGATTGCCGGGCTGATGACCCTGCAGTTGCTGGCGCACCCTGAGCTGCATTGATCAGCCCGTCCAAAACAACAAAAAGGATCGACC
|
|
| DNA Sequence for Gene |
>Psefu_2580
ATGAGCATCTGGCGTCAGCGCCCCAATCTCGACGAACTCAATGCCGCCCAGCGCAATACCATCGGTGAGCTGCTGGACATCCGTTTCGAATCCTTCGATG ACGAGTCGATCACTGCCAGCATGGCCGTCGACTCGCGCACCCATCAGCCTCACGGCCTGCTGCACGGCGGCGCTTCGGTGGTGCTGGCCGAAAGCCTGGG CTCCACGGCCAGCTACCAGTGCATCGACACCCAGAAGTTCTTCTGCGTGGGCCTGGAGGTCAATGCCAACCACCTGCGTGGGCTGCGCAGCGGGCGCGTC ACGGCGGTGGCCAAAGCCGTTCACCTTGGGCGCACCACCCATGTCTGGGACATTCGCCTGAGCGGCGATGACGGCAAGACCAGCTGTATCTCGCGCCTGA CCGTGGCCGTCGTGCCGCACAGTAGTCAGCCGCCTGAGCGTGGCTAA
BLASTN Search
|
DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
|
|
| DNA Sequence Downstream of Gene |
GCGCCGGAGCAGGGCGTCCGGCTGTTGGCCGGAGCGTCGTGCTTCCTGACCGTTACAGGCGTTGTCGGCCTGGCAAGGCTGGCTGACAATCCCAGCACTG CCTGCCACCTGCGCGATTGCCATGGATCAGCTCATCTTCTTCGCCCACGCCAACGGATTTCCTTCGGCCACCTACCGCAAGCTGTTCGCGGCGCTGGCAC CGGAGTACCAGGTGCAGCACCTGGCGCAGCATGCCCACGACCCTCGTTTTCCAGTGAATGACAACTGGGGCAACCTGGTCGACGAGCTGCTTCATCATCT TGAACAGTGCGCTGGGCCGGTTTGGGGCGTGGGCCATTCGCTGGGCGGGGTGCTGCATTATCATGCGGCGCTGCTTCGCCCTGATTTGTACCGGGGCGTG GTCATGCTTGATTCGCCGGTGCTCAGCCGCGTCGACCAACTGGTGATTCACGCGGCCAAGCGGTTTGGCTTTATCGACCGGCTCACCCCGGCCGGGCGCA
|
|
| Amino Acid Sequence |
>phenylacetic acid degradation-related protein
MSIWRQRPNLDELNAAQRNTIGELLDIRFESFDDESITASMAVDSRTHQPHGLLHGGASVVLAESLGSTASYQCIDTQKFFCVGLEVNANHLRGLRSGRV TAVAKAVHLGRTTHVWDIRLSGDDGKTSCISRLTVAVVPHSSQPPERG
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
|