Pseudomonas aeruginosa AZPAE15033, NT49_RS26810

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Sequence Data

Strain Pseudomonas aeruginosa strain AZPAE15033 AZPAE15033_contig_41, whole genome shotgun sequence. [Details]
DNA Sequence Upstream of Gene
CTACAGCGAGGCGATCGTGGTGATGGCGCGCCCCGGTCACCCCCTGGCCCAGGCCGCCGCGCTGGACTGGGAAGACGTGCGGCGCTACGACTGGATCGTC TGGCCGCCCGGCTCGCCGATCCGCAGCAAGCTCGACATGGCCCTGACCCAGGGCGGCCGGCAGCCGCCGGCCTACCGCCTGGAGTCATCGTCGATGCTGG CCAACATCGAATTGTTGCGTGGCAGCGACATGCTGTCCATCGGCTCGGCGCGGGTGGTCGAGCACCTTGCCGGGCTCGGCCTGGTGGCCAGGCTGGCGCT GGAGATTCCCGGCGAGGGCGCGGTGGGCATGTGCTGGCGCGACGAACCGCACCGCGACCGTGCCAGCGAAGACCTGCTGGCCTGCCTGCGCGAAGGCGCG GCGGCCGAGTAGGGCGCCGGCCGGCGGGTGCTATTGCAAAAAGGCCGCGGCTTCTCGACAATGCGATTCATTATCATTCATGTGTCGCCCCGACTTTCCC
DNA Sequence for Gene
>NT49_RS26810
ATGTCCGCCCCGATCCTTCTCAGCGCCCACCATCGCGCCATGCATGCGCTGTACAGCGAGCACCATGGCTGGTTGCAGAACTGGCTGCGCGGCAAGCTGG GCTGCGCGGCGGACGCGGCGGACCTGGCCCAGGACACCTTCCTGCGCATCCTGCTCAAGCGCGAACTGCGCGAGATCGGCATGCCGCGCGCGTTCCTGCG GACCATCGCCCGCGGCCTGGTGATCGACCACTGGCGTCGCGAGGAACTGCAGCGCGCCTACCTCGAAAGCATCGCCCACCTGCCCGAGGCACAGGCGCCG TCGCCCGAGGCGCGGGAACTGGTGCTGGAACTGCTGGAGGAAATCTCGCGGATGCTCGACGGGCTCAAGCCGAAGGTCCGCACCGCCTTCCTCCTGGCCC AGTGCGAAGACCTCAGCCACCGGCAGATCGCCGAACGCATGGGGGTTTCCCAGCGTAGCGTCGAGCGCTACGTGGCCGAGGCGCTGTACCACTGCTACCT GCTGCGCTACGGCGAATGA
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
GCGGAGCCGTGGACGGGACGCGCGGTAGGGTCGACGAAGCGGTGGTCAGGCAGGCCATCCACTGGCTGGTCCGCCTGCGCTCGCAGCCGGCCGACGATCG CCTGCAGCGCGCCTGCGCGGCCTGGCGCGCGGAGCACGGCGAGCACGAGCGGGCCTGGCAGCAGGTCAGCGCGCTCAACGAAGAACTGCAAGGACGCTTC AAGGCGCTGCCCGGCGGGGTCGCCTACGGCACCCTGGACAGTAGCGCGCAGCGCCTGCAGCGGCGCCAGGCGCTGAAACTGCTGTCGCTGCTGGTGGCCG GCGGCGCCGTGGCCTGGGTCGGTCGCGATAGCCTGCCCTGGCAGCGCCTGAGCGCCGACTACAGCACCGCCACCGGCGAGCGGCGCAGTATCGAGCTGGT CGACGGCACCCGCCTGCAACTGAACACCGACAGCGCGGTCGACGTGCGCTACGACGCCGGCCAGCGCCTGATCCTCCTCGCCCGCGGCGAGATCTTCCTC
Amino Acid Sequence
>RNA polymerase sigma factor
MSAPILLSAHHRAMHALYSEHHGWLQNWLRGKLGCAADAADLAQDTFLRILLKRELREIGMPRAFLRTIARGLVIDHWRREELQRAYLESIAHLPEAQAP SPEARELVLELLEEISRMLDGLKPKVRTAFLLAQCEDLSHRQIAERMGVSQRSVERYVAEALYHCYLLRYGE
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site