Strain | Pseudomonas aeruginosa strain AZPAE15033 AZPAE15033_contig_31, whole genome shotgun sequence. [Details] | |
DNA Sequence Upstream of Gene |
GCCGGCAAGGCGGAGCATGTGCTGTTCCCCGGCGACATCCCGGTGATCCAGGTAGATCGCGGCGGCCAGGTGACCTACCACGGCCCCGGCCAGTTGGTCA CCTACCTGCTGCTCGATGTCCGCCGCCTGGGACTGGGCGTGCGCGAGCTGGTCAGCCGGATCGAGCAGAGCCTGATCGGCCTGCTGGCGTCCTATGACGT GCAGGCCGTGGCCAAGCCGGACGCGCCGGGTGTCTACGTCGACGGGGCGAAGATCGCCTCCCTCGGCCTGCGCATCCGCAACGGCTGTTCCTTCCATGGC CTGGCGCTGAACCTGGACATGGACCTGCGACCGTTCCAACGAATCAATCCCTGCGGCTACGCCGGGATGCCCATGACCCAACTGCGCGACCTGGTTGGGC CGGTGGATTTTGCCGAGGTGTGTACCCGATTGCGCGCTGAGCTCGTCTCACGCCTTGGCTACGCTGAACAGAAGACCCTTACGGGCGGGATCGAACTGAC
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DNA Sequence for Gene |
>NT49_RS23935
ATGAGCACTGTTGTGGAGAAGTCCGGAGAAGCCAAGCCGGGCAAGGTGGAAGTCGGCGTGAAGCTGCGCGGCGCGGAAAAGGTCGCGCGGATTCCGGTGA AGATCATTCCCACCGAGGAACTGCCGAAGAAACCCGACTGGATCCGCGTGCGCATCCCGGTTTCCCCCGAGGTCGACCGCATCAAGCAACTGCTGCGCAA GCACAAGCTGCACAGCGTCTGCGAAGAGGCGTCCTGCCCGAACCTGGGCGAGTGCTTCTCCGGCGGCACCGCGACCTTCATGATCATGGGCGATATCTGC ACCCGACGCTGCCCGTTCTGCGATGTCGGTCATGGCCGGCCGAAGCCGCTGGACGTCGACGAGCCGACCAACCTGGCCATCGCCATCGCCGACCTGCGGC TGAAGTACGTGGTGATCACCTCGGTGGACCGCGACGACTTGCGCGACGGCGGCGCCCAGCACTTCGCCGACTGCCTGCGCGAGATCCGCAAGCTGTCGCC GGGGATCCAGCTGGAAACCCTGGTGCCCGACTATCGCGGTCGCATGGACATCGCCCTGGAGATCACCGCCAACGAGCCGCCGGACGTGTTCAACCATAAC CTGGAGACGGTACCGCGCCTGTACCGCTCCTCGCGGCCGGGCTCGGACTTCGAGTGGTCGCTGGACCTGCTGCAGAAGTTCAAGCAGATGGTTCCGCACG TACCGACCAAGTCCGGGCTGATGCTCGGCCTGGGCGAGACCGACGATGAGGTCATCGAGGTCATGCAGCGGATGCGCGAGCACGACATCGACATGCTGAC CCTCGGCCAGTACCTGCAGCCGTCGCGCAACCACCTGCCGGTGCAGCGCTTCGTGCATCCGGACACCTTCGCCTGGTTCGCCGAGGAAGGCGAGAAGATG GGCTTCAAGAACGTCGCGTCCGGCCCGCTGGTGCGTTCGTCCTACCATGCCGACCAGCAGGCGCACGGCAACAAGATCGGCTGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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DNA Sequence Downstream of Gene |
TCGACGCCGCGCCAATGCCTCCGACGCCGCGTCCCTGCACAGGGACGCGGCGTTTTTCTTTGGGCAGCCACGAAGCCTCTTCGGACGGAGGACGAATAAC CGCTTGCGGTTATCCGCCGGCGCGTAGGTGAGTACCGTTTGCTCTCATCCCTGTGCGGTAACGAAGCGACTGCGCTGGCCGAGCTGCCGCACCGCCTCGA TCAGTGCATCGGCCGCCAGGCTGGGTTGGCGCGAGAAGGCGTAGAAACGCGCCTCCGGCAGCGTCGGAAAACCCTGTTCCGGGCCCAGTTCGCGCAGCCC CTCGCGCATCTGGCTGCGCGCCACCACCGTCACGGCGAAACCAGCCAGCGCGGCGGACAGGCAGCCGGCCATGCTGGCGCTCTCGAACACCAGGCGCCAG GGACGCGCAGCGGCGCCGAGGGCTGTAATCGCCGCTTCGCGGTAGACGCAGGGTTCGGGGAACAGCGCCAGCGGCAGCGGTTCGCCCGCGGGCAGCTCGA
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Amino Acid Sequence |
>lipoyl synthase
MSTVVEKSGEAKPGKVEVGVKLRGAEKVARIPVKIIPTEELPKKPDWIRVRIPVSPEVDRIKQLLRKHKLHSVCEEASCPNLGECFSGGTATFMIMGDIC TRRCPFCDVGHGRPKPLDVDEPTNLAIAIADLRLKYVVITSVDRDDLRDGGAQHFADCLREIRKLSPGIQLETLVPDYRGRMDIALEITANEPPDVFNHN LETVPRLYRSSRPGSDFEWSLDLLQKFKQMVPHVPTKSGLMLGLGETDDEVIEVMQRMREHDIDMLTLGQYLQPSRNHLPVQRFVHPDTFAWFAEEGEKM GFKNVASGPLVRSSYHADQQAHGNKIG
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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