Pseudomonas fulva 12-X, Psefu_1947
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas fulva 12-X chromosome, complete genome. [Details] | |
| DNA Sequence Upstream of Gene |
GCCAAGGCTCGAAGATCGTCATCAAGGTGCCGCTGACCCTGGCGATCATGCCGACGCTGATGGTGATGCTCGGCAACCAGGCGTTCGCCTTCCCGCTGGT CAACGTCAACGAGATATTCCACCTCGATCTGTCGCGCACCAACGTGGTCGACGGCCAGGAAGTGGTGATCGTTCGCGACAAGGCGCTGCCGCTGTTCTAC CTCAAGCGCTGGCTGGTGAGCAGTGCTGCGCACGAAGAGCAGGGCGAAGGGCATGTGGTTATTCTCACCGTGGGCAACCAGCGCATCGGCTTCGTGGTCG ACCAGCTGGTGGGCCAGGAAGAGGTGGTGATCAAGCCGCTGGGCAAGATGCTTCAGGGTACCCCCGGCATGTCCGGTGCGACCATCACCGGTGATGGCCG CATCGCGCTGATTCTCGATGTGCCCAGCATGCTCAAGCGCTACGCACGGCGTCTCTGATCGTCCGCGGCACGGCGACGGCCGTACCGCTTAGGAGTGTTT
|
|
| DNA Sequence for Gene |
>Psefu_1947
ATGGTTGTCAAGGTACTGGTAGTCGATGACTCCGGTTTTTTCCGTCGCAGGGTTTCGGAAATTCTCTCGTCGGACCCCAACATCACCGTGGTCGGTACGG CCACCAATGGACGTGAGGCGATCGATCAGGCCCTGGCATTGAAGCCGGACGTGATCACCATGGATTACGAGATGCCGCTCATGGACGGCATCACCTCCGT GCGCAACATCATGCAGCGCTGCCCCACGCCGGTTCTGATGTTTTCCTCGCTCACCCACGAAGGCGCCCGCGTCACCCTGGACGCGCTGGATGCCGGTGCG GTGGACTTTCTGCCGAAAAACTTCGAAGACATCTCGCGCAACCCCGAGAAGGTCAAGCAACTGCTGTGCGAGAAGGTGCATAGCATCTCGCGCAGCAACC GCCGGGGGATCGGCACGGCGTCCCTGACGCCGCCTGCCGGCGGTGGCCTGAGCCGACCTGCCAGCACGCCGAGCACGCCAGCTCCCGCTGCGCGCCCGCA GCCGAGCGTCAGCCATCCGCCGGCCGAGCGGCATGCTTCGCCTTCCAGCGCGGCGCCCAAGCGCAAGGCCTACAAGCTGGTGGCTATCGGCACCTCGACC GGTGGTCCGGTGGCCCTGCAGCGTGTGCTGACCCAATTGCCGGCCAACTTCCCGACGCCCATCGTGCTGATCCAGCATATGCCGGCCGCTTTCACCAAGG CTTTCGCCGAGCGTCTGGACAAGCTCTGCAAGATCAACGTCAAGGAAGCCGAGGACGGCGATATCCTGCGCCCCGGCCTGGCCATCCTGGCTCCCGGCGG CAAGCAGATGATGATCGACGGCCGCGGCACCATCCGCATCCTGCCCGGTGACGAGCGGTTGAACTACAAGCCGTGCGTGGACATCACCTTCGGCTCTGCG GCCAAGTCCTACAACGACAAGGTGCTGGCCGTGGTGCTGACCGGCATGGGCGCCGACGGCCGTGAAGGCGCGCGCCTGCTCAAGCAGGGCGGCAGCCAGG TATGGGCTCAGGATGAAGCGAGCTGCGTGATCTACGGCATGCCCATGGCCATCGTGAAAGCCAACCTGGCCGACGCGGTGTATCCCCTTGATGATATCGG TCGCCATCTGGTCGAGGCCTGCCTCTGA
BLASTN Search
|
DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
|
|
| DNA Sequence Downstream of Gene |
TGGATGTGCTGAGCCTGATCGGCGTCATTCTGGCGTTCGTCGCGATTCTCGGCGGCAACTTTCTGGAAGGCGGTCATGCCTCGGCACTGCTCAACGGCCC GGCGGCCTTGATCGTGATCGGCGGAACTTTGGGCGCAGCGCTGCTGCAGACGCCGGTGGCGGTGTTCAAGCGTGCGGTGAGCATCCTGCGCTGGATTTTC GTACCGCCCAAGATCGACCTGGCGGGCGGCATCGACCGGGTGGTGAACTGGAGTATGACGGCGCGCAAGGAGGGCCTGTTGGGCCTGGAGGCGATCGCCG ATGGCGAGCCCGATCCCTATGCGCGCAAGGGCCTGCAACTGCTGGTCGACGGCGCCGAGCCGGAAGCCATTCGCAGCATCCTCGAAGTCGATCTTTACAC CCAGGAAAGCCGTGATATCCAGGCCGCCAAGTTCTACGAGTGCATGGGCGGCTATGCGCCGACCATTGGCATCATCGGTGCGGTCATGGGGCTGATCCAT
|
|
| Amino Acid Sequence |
>chemotaxis protein CheB
MVVKVLVVDDSGFFRRRVSEILSSDPNITVVGTATNGREAIDQALALKPDVITMDYEMPLMDGITSVRNIMQRCPTPVLMFSSLTHEGARVTLDALDAGA VDFLPKNFEDISRNPEKVKQLLCEKVHSISRSNRRGIGTASLTPPAGGGLSRPASTPSTPAPAARPQPSVSHPPAERHASPSSAAPKRKAYKLVAIGTST GGPVALQRVLTQLPANFPTPIVLIQHMPAAFTKAFAERLDKLCKINVKEAEDGDILRPGLAILAPGGKQMMIDGRGTIRILPGDERLNYKPCVDITFGSA AKSYNDKVLAVVLTGMGADGREGARLLKQGGSQVWAQDEASCVIYGMPMAIVKANLADAVYPLDDIGRHLVEACL
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
|