Pseudomonas fulva 12-X, Psefu_1875

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments
Molecular Function GO:0003824 catalytic activity
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PF07685
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0042242 cobyrinic acid a,c-diamide synthase activity
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PTHR43873
 ECO:0000259
match to InterPro signature evidence used in automatic assertion

Functional Classifications Manually Assigned by PseudoCAP

Pathways

Database Xref Pathway Version Evidence PMID
KEGG pfv01100 Metabolic pathways 81.0+/01-23, Jan 17 ECO:0000249
sequence similarity evidence used in automatic assertion
KEGG pfv00860 Porphyrin and chlorophyll metabolism 81.0+/01-23, Jan 17 ECO:0000249
sequence similarity evidence used in automatic assertion

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
Hamap MF_00027 Hydrogenobyrinate a,c-diamide synthase [cobB]. IPR004484 Cobyrinic acid a,c-diamide synthase CbiA 16 431 37.162521
PANTHER PTHR43873 COBYRINATE A,C-DIAMIDE SYNTHASE IPR004484 Cobyrinic acid a,c-diamide synthase CbiA 17 438 1.4E-117
NCBIfam TIGR00379 JCVI: hydrogenobyrinic acid a,c-diamide synthase (glutamine-hydrolyzing) IPR004484 Cobyrinic acid a,c-diamide synthase CbiA 19 437 1.9E-80
CDD cd03130 GATase1_CobB - - 250 438 2.24494E-72
CDD cd05388 CobB_N - - 17 201 2.29454E-83
Gene3D G3DSA:3.40.50.880 - IPR029062 Class I glutamine amidotransferase-like 248 424 1.2E-10
Pfam PF07685 CobB/CobQ-like glutamine amidotransferase domain IPR011698 CobB/CobQ-like glutamine amidotransferase 250 428 1.0E-28
SUPERFAMILY SSF52540 P-loop containing nucleoside triphosphate hydrolases IPR027417 P-loop containing nucleoside triphosphate hydrolase 18 204 5.01E-40
Pfam PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain IPR002586 CobQ/CobB/MinD/ParA nucleotide binding domain 19 197 6.3E-14
SUPERFAMILY SSF52317 Class I glutamine amidotransferase-like IPR029062 Class I glutamine amidotransferase-like 248 363 7.1E-28
Gene3D G3DSA:3.40.50.300 - IPR027417 P-loop containing nucleoside triphosphate hydrolase 55 194 2.2E-9

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.