Pseudomonas fulva 12-X, Psefu_1855

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments
Molecular Function GO:0004185 serine-type carboxypeptidase activity
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PTHR30023
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Biological Process GO:0006508 proteolysis
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PTHR30023
 ECO:0000259
match to InterPro signature evidence used in automatic assertion

Functional Classifications Manually Assigned by PseudoCAP

Pathways

Database Xref Pathway Version Evidence PMID
KEGG pfv00550 Peptidoglycan biosynthesis 81.0+/01-23, Jan 17 ECO:0000249
sequence similarity evidence used in automatic assertion

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
Gene3D G3DSA:3.40.710.10 - IPR012338 Beta-lactamase/transpeptidase-like 291 480 2.8E-55
PRINTS PR00922 D-Ala-D-Ala carboxypeptidase 3 (S13) family signature IPR000667 Peptidase S13, D-Ala-D-Ala carboxypeptidase C 381 395 3.0E-21
PRINTS PR00922 D-Ala-D-Ala carboxypeptidase 3 (S13) family signature IPR000667 Peptidase S13, D-Ala-D-Ala carboxypeptidase C 443 456 3.0E-21
SUPERFAMILY SSF56601 beta-lactamase/transpeptidase-like IPR012338 Beta-lactamase/transpeptidase-like 37 486 3.72E-87
PRINTS PR00922 D-Ala-D-Ala carboxypeptidase 3 (S13) family signature IPR000667 Peptidase S13, D-Ala-D-Ala carboxypeptidase C 79 98 3.0E-21
PANTHER PTHR30023 D-ALANYL-D-ALANINE CARBOXYPEPTIDASE IPR000667 Peptidase S13, D-Ala-D-Ala carboxypeptidase C 15 486 1.0E-111
Gene3D G3DSA:3.50.80.20 - - - 103 182 1.2E-21
NCBIfam TIGR00666 JCVI: D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase IPR000667 Peptidase S13, D-Ala-D-Ala carboxypeptidase C 74 466 3.9E-60
PRINTS PR00922 D-Ala-D-Ala carboxypeptidase 3 (S13) family signature IPR000667 Peptidase S13, D-Ala-D-Ala carboxypeptidase C 366 380 3.0E-21
PRINTS PR00922 D-Ala-D-Ala carboxypeptidase 3 (S13) family signature IPR000667 Peptidase S13, D-Ala-D-Ala carboxypeptidase C 306 328 3.0E-21
Pfam PF02113 D-Ala-D-Ala carboxypeptidase 3 (S13) family IPR000667 Peptidase S13, D-Ala-D-Ala carboxypeptidase C 73 466 1.3E-79

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.