Pseudomonas aeruginosa AZPAE15033, NT49_RS08820

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Sequence Data

Strain Pseudomonas aeruginosa strain AZPAE15033 AZPAE15033_contig_10, whole genome shotgun sequence. [Details]
DNA Sequence Upstream of Gene
GACACTGACCAGTTGACCGTGGCGGTAGTGGACATCGGCGCGACCATGACCACCCTGAGCGTCCTGCACAACGGACGCACCATCTATACCCGCGAACAGC TGTTCGGCGGTCGCCAGCTCACCGAGGAGATCCAGCGGCGTTACGGACTCTCGGTGGAAGAAGCCGGTCTCGCCAAGAAGCAGGGCGGTCTTCCGGATGA CTACGACAGCGAAGTTCTGCGTCCGTTCAAGGACGCCGTGGTGCAGCAGGTTTCCCGCTCGCTGCAGTTCTTCTTCGCCGCCGGACAGTTCAACGACGTC GACTACATCGTCCTGGCGGGCGGTACGGCGTCTATCCAGGATCTCGATCGGTTGATCCAGCAGAAGATCGGCACCCCGACCCTGGTCGCCAACCCGTTCG CCGACATGGCGCTGAACGGCAAGGTGAATGCCGGCGCCCTGGCCAGCGACGCTCCGGCGTTGATGATCGCCTGCGGCCTGGCGTTGAGGAGTTTCGACTG
DNA Sequence for Gene
>NT49_RS08820
ATGGCACGGATCAACCTTCTACCCTGGCGCGAAGAGCTGCGCGAGCAGCGCAAGCAGCAGTTCCTGGTGATTCTTGGCGGCGTCCTTTTGGTTTCCGGCG CACTGGTGTTTCTTGGTGGCCAATATCTCAACACTGCGATTGAGCATCAGGGCGCGCGCAACGACTTCCTGCGCAAGGAGATCGTTGTGCTGGATGCGCG GATCAAGGAAATCAGCGAGTTGAGATCGCGGCGCCAGCAGTTGCTCGAGCGGATGAAGATCATTCAGGACCTGCAGGGCAACCGCCCGATCATTGGTCGG GTGTTCGACCAACTGGTGCGCACCTTGCCTGACGGTGTGTATTTCACCGACCTGAAGATGACCGGCAAGAACATCGCCATCGCCGGCGCGGCCGAGTCCA ACAACCGCGTTTCCAATCTCATGCGCAACATGGACGCGTCCGAGTGGCTGACCGCCCCGACCCTGAACGAGGTCAAGGCGGTGACCCAGGGCGCGGTGGA CCAGGCCAACGTGTTCCAACTGACCGTGCAGCAGACGCAGCCCGGCGAGGAAGACGCCAAGGCGAAGCATGGGGTTGCGCAAGGAGCCAAGAAATGA
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
GTCTGGCCAGTTCCCTGGAAAGTCTGCGCAAGATCGACGTAAACGACCTCGATCTGAACAACATCGGTTCCTGGCCGGCGGCGGTCAAGGTCATCGTCTG CGTGCTGCTGACCGCGGCGGTCCTGGCGCTGGGCTACAACTTCCATCTCCGTGACTTGCAAACACAGCTCGAACAGCAGGCTGCGCAAGAAGAATCGCTC AAGCAGCAATTTGCTACCAAAGCGTTCCAGGCCGCGAACCTGGAAGCCTACAAGGCACAGATGAAAGAGATGGAGGAGTCCTTCGGCGCCTTGCTGCGGC AGTTGCCCAGCGACACCGAGGTACCCGGGCTGCTCGAGGACATCACTCGTACCGGTCTGGGCAGCGGCCTGGAGTTCGAGGAGATCAAGCTGCTCCCTGA AGTCACTCAGCAGTTCTATATCGAGCTGCCGATCCAGATCAGCGTGGTCGGCGGCTACCACGACCTGGCGACCTTCGTCAGCGGCGTGTCCAGCCTGCCG
Amino Acid Sequence
>pilus assembly protein PilN
MARINLLPWREELREQRKQQFLVILGGVLLVSGALVFLGGQYLNTAIEHQGARNDFLRKEIVVLDARIKEISELRSRRQQLLERMKIIQDLQGNRPIIGR VFDQLVRTLPDGVYFTDLKMTGKNIAIAGAAESNNRVSNLMRNMDASEWLTAPTLNEVKAVTQGAVDQANVFQLTVQQTQPGEEDAKAKHGVAQGAKK
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site