Pseudomonas aeruginosa AZPAE15033, NT49_RS08420
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas aeruginosa strain AZPAE15033 AZPAE15033_contig_10, whole genome shotgun sequence. [Details] | |
| DNA Sequence Upstream of Gene |
TGCTCGACGGCAAGCCTGCCGGAGTGCCGGGACGCAGCCCGGTGTTCCCGTTGAAGAACCTCGATCGCGGCACCCACCAGGTCGCAGTGGAAATCATCGA TGGCGACGGCATGACCGTCGAAAGCACCCCGAGCCAGCCCTTCCACCTGCATCGAGTGAGCATCGCCGGGCAACCCCTGCCGGAGGTCGATACGCCGCTG GTCAGCGCGATAGAGCCAAGCGAGCGCTAGCCGAACTTCCCCTGCCCACTCCACGGTGCGCGGGATTTTCCGGTTTTTTTCCCGACTCTCCTGGCGAAAA CGCCGCCGGCCACGCCAACGCACCAGATTGGTGCGATTACCCGCACCACTTTCTATACTGTCCCCATTTCGGGTCACCGCTCGTCGCCGAAAACCTTCCC GGCGCACCTCTAGCCAGCGCCTCGGCAGAAAAAACGCGCCTTTTCGGCGCCTGGTTTGCTTTTTGCATTTTCCTGCCCAACCTTGGAACAGCTGCCCGCC
|
|
| DNA Sequence for Gene |
>NT49_RS08420
ATGCCGACCGATACCCTGCACCGACTGTTGCTCGACAACCTGACCACCGCGGTGATCCTGCTCAACGGCGAACTGCGCCTGGAGTACATGAACCCGGCGG CGGAGATGCTCCTGGCCGTGAGCGGCCAGCGCAGCCACGGGCAATTCATCAGCGAGCTGTTCACCGAATCGCCGGAAGCCTTGAACTCGCTGCGCCAGGC GGTGGAACAGGCACATCCGTTCACCAAGCGCGAAGCGACCCTGACCTCGATCACCGGCGTCAGCATCACGGTCGACTATGCGGTGACGCCCATCCTCAAC CGCAACGAGACGCTGCTGCTGCTCGAGGTCCATCCGCGCGACCGGCTGATGCGGATCACCCGCGAAGAAGCGCAGTTGTCCAAGCAGGAGACCACCAAGC TGCTGGTGCGCGGGCTCGCCCACGAGATCAAGAACCCGCTCGGCGGCATCCGCGGCGCAGCGCAACTGCTGTCTCGCGAGTTGCCGGAAGAGTCGCTGAA GGACTACACCAACGTCATCATCGAAGAAGCCGACCGGTTGCGGAACCTGGTGGACCGCATGCTCGGCTCGAACAAACTGCCGAACCTGGCGCCGACCAAC ATCCATGAAGTGCTGGAGCGGGTCAGCAGCCTGGTGGAAGCGGAGAGCCAGGGCAGCATCACCCTGGTCCGCGACTACGACCCGAGCATCCCCGACCTGC TGCTCGACCGCGAGCAAATGATCCAGGCCGTGCTCAACATGGTACGCAACGCCATGCAGGCGATCGCAGGGCAGAACGACCTGCGCCTCGGTCGCATCAC CCTGCGCAGCCGTACCCTGCGCCAGTTCACCATCGGCCACACGCGTCACCGCCTGGTGTGCAAGGTGGAGATCATCGACAACGGCCCGGGCATTCCGGCC GAGCTCCAGGAAACCATCTTCTACCCCATGGTCAGCGGCCGTCCGGACGGTACCGGACTCGGCCTGGCCATCGCCCAGAACATCATCAGCCAGCACCAGG GGCTGATTGAATGCGAGAGCCACCCCGGCCATACCGTGTTCAGTCTGTTCCTGCCCCTGGAACAAGGAGTGCATTGA
BLASTN Search
|
DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
|
|
| DNA Sequence Downstream of Gene |
CCATGAGCCGATCAGAGACCGTCTGGATCGTCGACGACGACCGCTCCATCCGCTGGGTACTGGAAAAAGCCCTGCAACAGGAAGGCATGACCACGGTGAG CTTCGACAGCGCCGACAGCGTGATCGGCCGCCTCGGCCGGCAGCAGCCGGACGTGATCATCTCCGATATCCGCATGCCCGGCGCCAGCGGCCTCGACCTG CTGGCGCAGATCCGCGAACTGCATCCGCGCCTGCCGGTGATCATCATGACCGCGCATTCCGACCTCGACAGCGCGGTGGCCTCCTACCAGGGCGGCGCCT TCGAATACCTGCCCAAGCCGTTCGACGTCGACGAGGCGGTCTCCCTGGTCAAGCGCGCCAACCAGCACGCCCAGGAGCAGCAGGGCCTGGAGCTGCCGGC GAACCAGGCGCGCACGCCGGAGATCATCGGCGAGGCGCCGGCGATGCAGGAGGTATTCCGCGCCATCGGCCGCCTCAGCCATTCCAACATCACCGTGCTG
|
|
| Amino Acid Sequence |
>sensor histidine kinase
MPTDTLHRLLLDNLTTAVILLNGELRLEYMNPAAEMLLAVSGQRSHGQFISELFTESPEALNSLRQAVEQAHPFTKREATLTSITGVSITVDYAVTPILN RNETLLLLEVHPRDRLMRITREEAQLSKQETTKLLVRGLAHEIKNPLGGIRGAAQLLSRELPEESLKDYTNVIIEEADRLRNLVDRMLGSNKLPNLAPTN IHEVLERVSSLVEAESQGSITLVRDYDPSIPDLLLDREQMIQAVLNMVRNAMQAIAGQNDLRLGRITLRSRTLRQFTIGHTRHRLVCKVEIIDNGPGIPA ELQETIFYPMVSGRPDGTGLGLAIAQNIISQHQGLIECESHPGHTVFSLFLPLEQGVH
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
|