Pseudomonas fulva 12-X, Psefu_1066
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas fulva 12-X chromosome, complete genome. [Details] | |
| DNA Sequence Upstream of Gene |
CGCTGATCTTCGGCAGCCCGCTGCACTGGACGGTGCCGGAGCTCAAGGGCTTCAACTTCGTCGGCGGCTGGGTGATGATTCCCGAACTGCTGGCGCTGAC CGTTGCCCTGACTGTCTACACCGCCGCGTTCATCGCCGAAAACGTGCGTTCCGGGATCAACTCGGTCAGCCACGGCCAGACCGAAGCTGCCCGCTCCCTG GGTCTGCGCCCGGGCCCGACGCTGCGCAAGGTGATCATCCCGCAAGCGATGCGCGTGATCATTCCGCCGCTGACCAGTCAGTACCTGAACCTGGCGAAGA ACTCGTCGCTGGCTGCCGGTATCGGCTACCCGGACATGGTGTCGCTATTCGCCGGTACCGTACTCAACCAGACAGGCCAGGCCATCGAGGTGATCGCCAT CACCATGAGCGTCTACCTGGCGATCAGTATCAGCATTTCCCTGCTGATGAACTGGTACAACAAGCGCATCGCGCTGATCGAGCGGTGAGGACCTAGCGCA
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| DNA Sequence for Gene |
>Psefu_1066
ATGAGCACTCATACTTTCAAACCGGATCTGCCGCCACCCAGCGCCAGCGTTGGCGTGGTCGCCTGGATGCGCAGCAATCTGTTCTCCAGCTGGCTCAACA CGCTGCTGACCCTGTTCGCCATCTACCTCGTCTGGCTGATGGTGCCGCCGCTGCTCAAGTGGGCGATCTTCGACGCCAACTGGGTAGGCACCACCCGCGC CGATTGCACCAAGGAGGGCGCCTGCTGGGTGTTCATCCAGTCGCGTTTCAGCCAGTTCATGTACGGCTTCTACCCCAGCGAATTGCGCTGGCGCGTGGAC CTGACCGCCGTGCTGGCCATCGTTGGCGCAGCGCCGCTGTTTATTTCCAAGTTCCCGCGCAAGGCTGTCTATGGCATCGCCTTCCTGGTGATCTACCCGA TCGTCGCCTGGTGCCTGCTGCACGGTGGCGTGTTCGGTCTGGATACCGTGCCGACCAGCCGTTGGGGCGGCCTGATGCTGACTCTGGTGATCGCCGCTGT CGGTATCGCCGGTGCGCTGCCGCTGGGCATCCTGCTGGCGCTGGGGCGTCGCTCCAACCTGCCGGCGGTGAAGGTGGTCTGCGTGACCTTCATCGAATTC TGGCGTGGTGTACCGCTGATCACCGTACTGTTCATGTCCTCGGTGATGCTGCCGCTGTTCCTGCCCGAGGGCATGAGCTTCGACAAGCTGATGCGTGCCC TGATCGGCGTGATCCTGTTCCAGTCGGCCTACATCGCCGAAGTGGTACGCGGTGGCCTGCAGGCGATTCCCAAGGGGCAATACGAAGCGGCCGGCGCCAT GGGCCTGGGCTACTGGCGGATGATGGGTCTGGTGATCCTGCCGCAAGCGCTCAAGCTGGTGATTCCGGGCATCGTCAACACCTTCATCGCTCTGTTCAAG GACACCAGTCTGGTGATCATCATCGGCCTGTTCGACCTGCTCAACAGCGTCAAGCAGGCGGCCGCCGATCCGGCTTGGCTGGGTATGGCGACCGAAGGCT ATGTGTTCGCCGCCCTGATTTTCTGGATTTTCTGTTTTGGTATGTCGCGCTACTCCATGCATCTGGAGAGGAAGCTCGACACCGGCCACAAGCGTTAG
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
GAGCTGTTCAGTATTTGCTGCGCGTCGGCCAGGCGGCGTTGAAAACACTCTCGGGATGCTCATGTACAGCCGTACACTCCGCTCCCTCGCCTGTTTTCGC CTTGCCTGGCTCTAGCTCGCTAAATCCTGAATCAGCCCTCGAGAGGAGTGAATTATGAGTGAAGCAAACAAGCAACCCAGCGCCGAGCCGATCATTCAGT TGCAGGGCGTGAACAAGTGGTACGGCCAGTTCCACGTCCTCAAGGACATCAACCTGGATGTACGTCAGGGCGAGCGTATCGTGCTGTGCGGTCCGTCGGG TTCGGGCAAGTCGACTACCATCCGCTGCATCAACCGTCTGGAAGAACACCAGGCCGGTCGCATCGTGGTCGATGGCACCGAGCTGACCCGTGACCTGAAG GACATCGAGACCGTGCGCCGCGAAGTGGGCATGGTGTTCCAGCACTTCAACCTGTTCCCGCACCTGACCGTGCTGCAGAACTGCATCCTGGCGCCGATGT
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| Amino Acid Sequence |
>polar amino acid ABC transporter permease
MSTHTFKPDLPPPSASVGVVAWMRSNLFSSWLNTLLTLFAIYLVWLMVPPLLKWAIFDANWVGTTRADCTKEGACWVFIQSRFSQFMYGFYPSELRWRVD LTAVLAIVGAAPLFISKFPRKAVYGIAFLVIYPIVAWCLLHGGVFGLDTVPTSRWGGLMLTLVIAAVGIAGALPLGILLALGRRSNLPAVKVVCVTFIEF WRGVPLITVLFMSSVMLPLFLPEGMSFDKLMRALIGVILFQSAYIAEVVRGGLQAIPKGQYEAAGAMGLGYWRMMGLVILPQALKLVIPGIVNTFIALFK DTSLVIIIGLFDLLNSVKQAAADPAWLGMATEGYVFAALIFWIFCFGMSRYSMHLERKLDTGHKR
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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