Pseudomonas fulva 12-X, Psefu_0897
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas fulva 12-X chromosome, complete genome. [Details] | |
| DNA Sequence Upstream of Gene |
CTGCTGGTGGTGTTCCTCTGCCTGGCGGCGCTGTACGAGAGCTGGTCGATTCCGTTCTCGGTGATCCTGGTGGTGCCGCTGGGTATTCTCGGTGCGCTGC TGTTCACCCTGGGTCGCGGGCTGTCCAACGACGTGTTCTTCCAGGTGGGTCTGATCACCACCATCGGTCTGTCGGCGCGTAACGCGATTCTCATCGTCGA GTTCGCCAAGGCGCTGCACGAGCAGGGCAAGAGCCATCTCGAGGCCGCCGTCGAGGCGTGCCGCATGCGTCTGCGTCCGATCATCATGACTTCCCTGGCG TTCATCCTCGGTGTGGTGCCGCTGGCCATCGCCAGTGGCGCGGGTTCAGGTAGCAAACATGCCATCGGTACCGGCGTGATCGGCGGTATGCTTACCGCCG CGGTCCTGGCGATCTTCTGGATTCCGCTGTTCTATGTGGTGGTCAGCTCGATGTTCAAGGACAAGAGCGTCAAACAATCCAATGATGAGGAGGCCGTCCA
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| DNA Sequence for Gene |
>Psefu_0897
GTGAGGCAGTCCCTGTTGTCTCTGGCAGTCGCGGGCATCGTGCTCAGCGGCTGCACCATGATCCCTGACTACCAGCGCCCGCAGTCGCCCGTCGACAACG CCTGGCCCCAGGGCAAAGCCTACGAGGGCAGCAACGTGCAGGGTTCGGTGGCTGCCGCCGATCTGGGCTGGCGCGAATTCCTGCGTGACCCGGCGCTGCA GCGCCTGGTGGAAACCGCGCTGAACAACAACCGCGACCTGCGCGTCGCGGCGTTGAACGTCGAAGCCTTCCAGGCCCAGTACCGCATCCAGCGTTCCGAG CTGTTCCCCAACATCTCGGCCGATGGCAGCGGTACTCGCCAGCGCACGCCAGCCGACCTGTCGCAGACCGGCCGTTCCACGGTTGGCGGCCAGTACAGCG CGACCGTGGGCGTGAATGCCTGGGAGGTGGATTTCTTCGGGCGTCTGCGCAGCCTCAACGAGCAGACCCTGCAGCAGTATTTCGCCACCGAAGAAGCCCG ACGCAGCACCCAGATCAGCCTGATCGCCAGCGTGGCCAACGCCTACCTGACGCTGCAGGCCGACGAGGCGCTGCTCAAGCTGACCCGCGACACCCTTGGC ACCTACCAACGCAGCCTGGAGCTGACCCAGCGCAGCTTTGACGTTGGTGTGACCGACGCGCTGTCCCTGAGCCAGGCGCGCACCGCAGTGCAGACCGCCC AGGCCAACCTGGCGCAGTACACCCGCCAGGTCGCCCAGGATCGCAACGCTCTCGGCGTGCTGCTCGGCGGCCCGGTGCCGGCCGACCTGCCGCAAGGCGA TGGCCTGGACAAGCAGCTGCTGGCCGACGTGCCGGCGGGCCTGCCGTCCGATCTGCTGCAGCGTCGTCCCGACGTGCTGCAGGCCGAGCGGGAACTGCTC GCCGCCAACGCCAGCATCGGCGCCGCGCGTGCCGCGTTCTTCCCCAGCATCAGCCTGACTGCCAACGCCGGCACCGCCAGCCGTCAGCTGTCGGGTCTGT TCGACGGCGGTTCGGGCACCTGGCTGTTCCAGCCGCAGATCAACCTGCCGATCTTCACGGCCGGTCGCCTGCGCGCCAACCTCGACTACGCCGAGATCCA GAAGAACATCCAGGTGGCGAACTACGAGAAGGCGGTGCAGACCGCCTTCCAGGAAGTCGCCGATGGTCTCGCCGCCCGCGGTACCTACGAGGAGCAGCTG CAGGCGCAGCGCAACCTGGTGGAAACCTCGGAGAACTACTACGACCTGGCCGACCGCCGTTTCCGTACCGGTGTGGACAGCTACCTGACCCTGCTCGATG CCCAGCGCCAGCTGTTCAGCGCCGAGCAGCAGCTGATCGGCGTACGCCTGTCGCAACTGACCAGCGAGATCAATCTGTACAAGGCGCTTGGTGGTGGCTG GAACGAGCGTAACCAGGCTGCGCCGGCCAGCGAGCCGGTCCCGCAGTCCTGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
CCGTAGCAAGCGACCAACAAAAAGCCCGCGTAGAACGCGGGCTTTTTCATGTCTGCGGTTCGGTTATTGCGGCGTCTGCACGCGGCTGGAACTGCCCATC TTGTGGCGGATCAGCTGGATCACGCCCGGCAGGATCGACACGATGATGATGCCGACGATCAGGTAGTGCAGGTTGCTCTGCACCGCCGGCAGATTGCCGA AGAAGTAGCCGCCGTAGGTGAACAGGGTGACCCACAGGATCGCGCCGACCACGTTGTAGGCAGCGAAATGGGCGTAGCTCATGCGGCCCATGCCGGCGAC GAAGGGCGCGAAGGTACGCACGATCGGCACGAAGCGCGCCAGGATGATGGTCTTGCCGCCATGGCGGGCGTAGAACTGCTGGGTGATTTCCAGGTGACGG CGGCGGAAGATCTTCGAGTCCGGGTTGCGGAACAGGCGCTCACCGAGGAAGCGGCCGATGGTGTAATTCACCGCATCGCCGAGAATCGCCGCGGTGATCA
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| Amino Acid Sequence |
>NodT family RND efflux system outer membrane lipoprotein
MRQSLLSLAVAGIVLSGCTMIPDYQRPQSPVDNAWPQGKAYEGSNVQGSVAAADLGWREFLRDPALQRLVETALNNNRDLRVAALNVEAFQAQYRIQRSE LFPNISADGSGTRQRTPADLSQTGRSTVGGQYSATVGVNAWEVDFFGRLRSLNEQTLQQYFATEEARRSTQISLIASVANAYLTLQADEALLKLTRDTLG TYQRSLELTQRSFDVGVTDALSLSQARTAVQTAQANLAQYTRQVAQDRNALGVLLGGPVPADLPQGDGLDKQLLADVPAGLPSDLLQRRPDVLQAERELL AANASIGAARAAFFPSISLTANAGTASRQLSGLFDGGSGTWLFQPQINLPIFTAGRLRANLDYAEIQKNIQVANYEKAVQTAFQEVADGLAARGTYEEQL QAQRNLVETSENYYDLADRRFRTGVDSYLTLLDAQRQLFSAEQQLIGVRLSQLTSEINLYKALGGGWNERNQAAPASEPVPQS
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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