Strain | Pseudomonas aeruginosa strain AZPAE14931 AZPAE14931_contig_3, whole genome shotgun sequence. [Details] | |
DNA Sequence Upstream of Gene |
AACCTGCTGAAGAAGATCAGCTTCCCGCGCATCTGCCTGCCGGTCATCGTACTGCTCAACGCCGGGGTCAATTTCGCCATCATCCTCGCCTTGTTCCTCG GCTTTCTCGCCCTCAGCGGGCGCCTGCCGGGCGCGGCATTGCTCGCGCTGGTGCCGCTGCTGGCGATCCAGGTGCTGTTCGCGGCGGGACTGGGGATGAT CCTCGGGGTGCTCAACGTGTTCTTCCGCGACGTCGGCCAGTTGTTCGGCATCTGCCTGCAGTTCTGGTTCTGGCTGACGCCGATCGTCTATCCGATCGGC ATCCTGCCCGAGGGTATCCGCTCGCTGATCGAACTCAACCCGATGACCGCGCTGATGCGCAGCTACCAGCAGCTGTTCCTCCACGGGCAATGGCCGGACT GGCCTTCATTGCTGCCGATCACCCTGCTGGCGCTGCTGCTGTGCGCGCTCGGCCTGCGTCTGTTCCGCCAGCGGGTCGGCGAAATGGTGGATGAACTCTG
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DNA Sequence for Gene |
>NS47_RS05520
ATGGGACAGATACGCGTATCCGGCCTCGGCAAGGCCTACAAGCAGTATCCCAATCGCTGGAGCCGGTTGTTCGAATGGCTGGTGCCTTTCAGTCCTTCGC GCCACCACCTGCACTGGATCCTGCGCGAGGTCGAGTTCACCATCGAGCCGGGCGAAGCGGTCGGCATCGTCGGGGTCAACGGCGCCGGCAAGAGCACCTT GCTGAAGATGATCGCCGGCACCACCCAGCCGACCTGCGGCGAGATCCGCGTGGCCGGCCGGGTCGCCGCGCTGCTCGAGCTGGGCATGGGCTTCCACCCG GACTTCACCGGCCGGCAGAACGTCTTCATGGCCGGGCAACTGCTGGGCATGCAGGTCGAGGAAATCCAGGCGCTGATGCCGGATATCGAGGCCTTCGCCG AAATCGGCGAGGCCATCGAGCAACCGGTGCGCACCTACTCCAGCGGCATGCAGATGCGCCTGGCGTTCAGCGTGGCGACTGCCCGGCGGCCGGACATCCT GATCGTCGACGAGGCCCTGTCGGTCGGCGATGCCTATTTCCAGCACAAGAGCTTCGAGCGCATCCGCAGTTTCCGCAAGGCCGGCACCACCCTGCTGATC GTCTCCCACGACCGCTCGGCGATCCAGTCCATCTGCGACTCCGCGATCCTCCTGGAGCAGGGACGGATGGCCATGCGCGGGCGGCCGGAAGAGGTGATGG ACTACTACAACGCCCTGCTCGCCGAGCGCGAGGGGCAGACCGTGCGCCAGGAAATGCTCGCCGACGGCCAGGTGCGGACGATTTCCGGCACCGGCGAGGC AGCGATCCTCGACGTACGGATGGTCGACCAGCGGCAGCGTGCGCTGGAGGTGGTCGAGGTAGGCCAGGCGGTGACGCTGGAAGTCGAAGTCGAGGTTCGC CAGGACATCGAGCGGCTGATCCTCGGCTTCATGATCAAGGACCGCCTCGGCCAGCCGATGTACGGGATCAATACCCACCGCCTGGACAAGGCCCTCACCG ACCTGAAGGCCGGCGAGCGCATCACCTACCGCTTCGCCTTCGACATGCGCCTGGGCAAGGGGCACTACTCGGTGGCGCTGAGCCTGTCGCGGCTGGACTC GCACCTGGACCGCAACTTCGAATGGCGCGACTACGGCCTGGTCTTCCATGTCATCAACAACCGCCAGGAAGACTTCGTCGGTTGCTCCTGGCTGGGCGCC GAAACCCATATCAGCCGCTCCGGCGAGGCGGCTCTGGACCCCACTTCCGCGGAGAGCACTCCATGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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DNA Sequence Downstream of Gene |
CGCGTCTGTTGGTCGAATGCACCTATGTGTTCGAGCATCCCAAGGTCAATTCCGGTATTCAGCGGGTGGTGCGCAACGTCATCCGCGAGTTGCCGGAAGC CGACGAGACGGTGGAGTGCATCCCGGTGGCAATGCTCGACGGCACCCTGTATCAGGTCCACAGCCTGGCGCCGCTGGACCCACGGCCGCATTCGCCGCTG GTACGCCTGCGCATCCTGGTGGAGCGAGCCGCCAACTACTTCTGGCTGGGCCAGCGCACCCTGGAACAGCGCCGCCCGTTCCGTTCCTCGCCGTGGGCCC GGCGCCTTCTCTATGTAGCCTGCCGCCTGTTCGCCTTCGCCTTCCTCAGCATTCCGCTGCGCCTGCTCGACCGCATCCTCGGCAAGCAGCAGCCTGCACC CGTGCGCGCGACCCCGCTCGAACATCGGGCCGGCGACCAACTGGTCTTGCTGGACTCCTCCTGGCACGCCGATTTCTTCCCGCTGGCGGAACGCCTCAAG
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Amino Acid Sequence |
>sugar ABC transporter ATP-binding protein
MGQIRVSGLGKAYKQYPNRWSRLFEWLVPFSPSRHHLHWILREVEFTIEPGEAVGIVGVNGAGKSTLLKMIAGTTQPTCGEIRVAGRVAALLELGMGFHP DFTGRQNVFMAGQLLGMQVEEIQALMPDIEAFAEIGEAIEQPVRTYSSGMQMRLAFSVATARRPDILIVDEALSVGDAYFQHKSFERIRSFRKAGTTLLI VSHDRSAIQSICDSAILLEQGRMAMRGRPEEVMDYYNALLAEREGQTVRQEMLADGQVRTISGTGEAAILDVRMVDQRQRALEVVEVGQAVTLEVEVEVR QDIERLILGFMIKDRLGQPMYGINTHRLDKALTDLKAGERITYRFAFDMRLGKGHYSVALSLSRLDSHLDRNFEWRDYGLVFHVINNRQEDFVGCSWLGA ETHISRSGEAALDPTSAESTP
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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