Strain | Pseudomonas aeruginosa strain AZPAE14931 AZPAE14931_contig_23, whole genome shotgun sequence. [Details] | |
DNA Sequence Upstream of Gene |
AGCCTCAGCCTGCAAAAGGTCGATGGCGACACCCCGTTCGACTTCATCGCGCAGAACGACCGGACCTTCCTCTACGAAAGCAACGCCATGCAGTACGCCG ACTTCAACGGCCCCGGCGAGCGCTCGTGGAAGATCCAGTACCAGGCCAGCCTGGCCTTCCTCGCCGCCCCGGACTGGCAGTTCGGCGCCGCCTACGGCCG TGGCCAGGCCGACCTGACCCGGGTCGACCCGGACAGCGCGGGCTACGGCTACCTCTACAACCCCAATGGCAAGAACGCCCAGCACTGGGAACGCGACCTG TCGCTGCGCTACGCCTTCCCCGCCGGCCCGGCCAAGGGCCTCAGCGTGACCCTGCGCTGGGCCACCCACCGCCCCGGCGAAGGCTACACCGCCCCCGGCA ACACCCGCGGCAACTCCAGCTCCGACGAATACCGGGTGGTGGTCGACTACCCGATCAGGTTGCTCTGAACCCACGGAACCAGAAAAAGAGAAATCCCCTC
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DNA Sequence for Gene |
>NS47_RS26180
ATGCGTGCAGCCCTGCTACCCACCTTCGGCGCCCTCTCCGCCGCGCTCTGCCTGGAGGCCCGCGCCGACGCCGTCGCGCTGCCGCCGCTGGCGCTCGGCA ACGCCAGCTTCATGGACGGCGTCAGCCGTCCCGGCATGCTCTTCGAACTGCCCCTGCAATACGTTCGGGCGAACAACGCCAGCGACGCCGGCGGGCATTC GGTTCCCGGTCGGCAACGGGTTCGTGGCACCACACTGTTGCCGCACTTCGCCTACCTCAGCCAGAACACCCTGCTCGGCGCCCACTACGGCGCCGAAGTG CTGCTGCCGCTGGTACGCCTGGACCTCGATATCGACGGCGGCCCGGACGGCCGGCGCACCCGCCAGGGCGACCTGATCGTCAGCCCGCTGATGCTGCAAT GGGGGCCCGCTACGCTGTTCGGCCGCCCCTACTGGCAGCGCCTGAACTTCGTCTTCTCCCTGCCCACCGGCGACTACGACAAGGACGCCGCGATCAACAC CGGCAGCAACACCTGGATCTTCAACCCGCACTACGCCTTCACCTGGGAACTGGGCGAGCGCCTGGAACTCAGCGGCCGCCTGCACTACGCCTGGATCAGC CGCAACGACGACCCCTCGCCGCGCCTGGGCGCAAACGACGTACAGCCGGGACAGGCGCTGCACGCGAACTTCTCGATCTCCTACGCGCTGGACCCGCACT GGCGGATCGGCCTGGCCGGCTACCAGTTGAAACAGATCAGCGCCGACCGCATCGACGACCACCGGCAGGCCGACTCGCGCGAGCAGGTCTTCGGCATAGG CCCGGGGGTGATGTACAGCCAGGGCAGGCAAACGCTGTTCGCCAACCTCTACGCCGAAAGCGGCGCGCGCAACCGCAGCGAAGGCAACCAACTGACCCTG CGCTACCTGCTGGCGTTCTGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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DNA Sequence Downstream of Gene |
ATCGGCGGATAACGCCCTGGAAACGCCGACACCTCCCCGGGTCCGTAGGGCGAATAACCGCTCGCGGTTATCCGCCGCTTAACCGCGACATCGGCGGATG ACGCCCATGGCGTTATTCGCCCTACACACCCCGAAAACACCGGAAAGCGTCCAGGTCCGTAGGGCGAATAACCGCTCGCGGTTATCCGCCGCTTATCCGC GACATCGGCGGATAACGCCCATGGCGTTATTTGCCCTACGCACCCCGGAAACGCCGGACAGCGTCCCAACTCCGTAGGGCGAATAACCGCTCGCGGTTAT CCGCCGCTTATCCGGGGTATCGGCGGATACCGCCTGTGGCGGTATTCGCCCTACAGGCCCTGGAAACGCCGGACAGCTCCCCCGGACATTTCCGCAGGCT CTCTCAGAAGCCCGGGAATTGGATAAAAACCCAGTAGGAGGATGATGGAGGGGCCGGCAAATCCATCCCGCAGGGACAGGACCGAACGGCACTGCCCTCT
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Amino Acid Sequence |
>hypothetical protein
MRAALLPTFGALSAALCLEARADAVALPPLALGNASFMDGVSRPGMLFELPLQYVRANNASDAGGHSVPGRQRVRGTTLLPHFAYLSQNTLLGAHYGAEV LLPLVRLDLDIDGGPDGRRTRQGDLIVSPLMLQWGPATLFGRPYWQRLNFVFSLPTGDYDKDAAINTGSNTWIFNPHYAFTWELGERLELSGRLHYAWIS RNDDPSPRLGANDVQPGQALHANFSISYALDPHWRIGLAGYQLKQISADRIDDHRQADSREQVFGIGPGVMYSQGRQTLFANLYAESGARNRSEGNQLTL RYLLAF
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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