Strain | Pseudomonas aeruginosa strain AZPAE14931 AZPAE14931_contig_2, whole genome shotgun sequence. [Details] | |
DNA Sequence Upstream of Gene |
CAACAGGCGCTACCTGGCGACCAAGGCCGGCAAGCTCGGGCACATGCTCGGCAGCCTGCACCAGGGCGAGGCGGAAACCACGTGAGTCGCCAGCAAGCCC GCGGCGCGCTGGGACGTGCCTGGTGGTTGCAACTGGCGTTGGCGCTGTTGCCGCTGATCCTGGTCGAGTTCTTCCTCGGCGAACTGCAACCCCTTCCCCA TGGCCTGGCGATGCCGCTGTTCATCGCCGCGCTGCTGTCGATGTTCGTCAACCTGCCGCTGTTCGGTGCCTACAAGCGTGGTCTCATCGCCACCCAGAAA GCGCTGGATACGGCGGAGGAAGCCGCCGCCTGGACCCGTCTGGCGCAGGTGCGCCGCAAGGCCCTGTTCGGCGCCAGCCTGCCGGCCTGGATCGGCGTGC CGGGTGTGTTCGCCGGGCTCAACGGCGTTGCGCTGATCCTGCTCGGGGTCACCAGCCTGGTGCTGTTCTGGCTCTACCGTATTCCGCGTCAACTCGGTTG
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DNA Sequence for Gene |
>NS47_RS04515
ATGCGCTCGTTCTGGCTGCTCGCCTGCCTGCTCCTCAGCCTTTCCGCCGGGGCGGCGCAGCGGGTGGTCAGCCTGGCGCCTTCGCTGACCGACAGCGTCC TCGAACTCGGCGCAGCGCGCCGCCTGGTCGGCGTGCTGGATGGCGGCGAGCGTCCGGCGGCGATTGGCGACCTGCCTTCCGTCGGCCGCTACGGCCAGGT CAATCTCGAACGCCTGCTGGAACTGCAGCCCGACCTGATCCTGGTCTGGCCCGGCAGCGTGCCCGAGGCGCAGTTGCAGCGCCTGCGGGACTTCGGCATC GCCCTCTTCATCGCCGAACCGCACAGCCTCGACGAACTGGCCCTGCAACTGGCTGCGCTGGGCGAGGCATTGGGCGAGGCCGAGGCCGGCCAGCGGTTGT CGGCCAGGTTCCGCGAAGGCATGCGGCGCCTGGCCGAGCGCTACCGGCGGGACAAGCCGCTGAAAGTGTTCTACCAGGTCTGGGACCGGCCGCTGTACAC CATTGGCGGACGCCAGGTGATCAGCGATGCGCTGCGCGTCTGCGGCGCCGAGAACCTATTCGGCGACCTGCCGCAGCCGGCGCCGCAGGTCAGCGTCGAG GCGGTTCTGGCGCGCGATCCGGCGGTCATCGTCGCCGGCAGTCACGCCCAGCTCGAACTCTGGCGGCAATGGCCGGCGCTGGCGGCGACGCGGCGCGGAC AGCTGTACCGGATCGAAGACAAGAACCTCGAGCGGCCGAGCTTCGCCATGCTGGCGGCGACCGAGAAACTCTGCCGCTCGCTCGCCGGGGCGCGCTGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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DNA Sequence Downstream of Gene |
ATGCTTGCCGGTATCGCGCGCTGTATCGGCGGATAACGCCGGCGGCGTTGTTCGCCCTACGGCAATTGGGGGGGAGGGCGAATAACCGCAACGCGGTTAT CGCTGCCAGTCGGCGGGGCATGTCGGTATGGTGGTGTATCGGCGGATAACGCCGGTGGCGTTATTCGCCCTACGGCAATTGGGGGGTAGGGCGAATAACC GCAACGCGGTTATCCGCCGTTGTCGCTGGGTTTGGCGCTACTGCCGGTCGAGACGCTGGCGTACTGCCTTTTCGATGCCCGCGGCATCCAGGCCGCATTC GGCGAGCATCTCGCTGGGCTTGGCGTGTTCGACGTAGTAGTCGGGCAGGCCCAGTTGCAGCAGCGGGACTTCGAGGCCCTCGCTGGCGAGGAACTCGCCG ACCGCCGAGCCGGCGCCGCCCATCACGGCGTTTTCCTCGATGGTCACCAGCAGTTCGTGGCTGCCCGCCAATTCGCGTACCAGGGCTTCGTCGAGGGGTT
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Amino Acid Sequence |
>iron-hydroxamate ABC transporter substrate-binding protein
MRSFWLLACLLLSLSAGAAQRVVSLAPSLTDSVLELGAARRLVGVLDGGERPAAIGDLPSVGRYGQVNLERLLELQPDLILVWPGSVPEAQLQRLRDFGI ALFIAEPHSLDELALQLAALGEALGEAEAGQRLSARFREGMRRLAERYRRDKPLKVFYQVWDRPLYTIGGRQVISDALRVCGAENLFGDLPQPAPQVSVE AVLARDPAVIVAGSHAQLELWRQWPALAATRRGQLYRIEDKNLERPSFAMLAATEKLCRSLAGAR
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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