Strain | Pseudomonas aeruginosa strain AZPAE14931 AZPAE14931_contig_19, whole genome shotgun sequence. [Details] | |
DNA Sequence Upstream of Gene |
ATAGCGCATGGACTTGCGGCAGGCCAGGGTGAACTCTACCGGCCACATGCGATCGCCCAGCGCCAGGGTGGTGCGGATCACGTAGCGGGTCTGGGCCTGG CCGTTGGAGCTGCGAATGCTCTTGCGCGCGACCATCGGCGCTTCGCAACGGTGCCGGCGCTGCACCAGCGTGCCGAGGTGGGCGGTGAAGCGCACCCACT TCTCGCCGTCGCGCTCGAAGGGAACGATGTCCGAGGCATGCAGGCTGGAGGTGCTGGCGCCGGTGTCGATCTTCGCGCGCAGCCCGACCATGCCCAGTTC GGGAAAGGCGATCCACTCGCGCAGACCGATGACGGAAAGCTGGTCGAATGTCTTCACGGGTAGGCATTCCAGGCGTTTTGCCGGCATTCTAGCAGGGCTA TGGGCGGCCGCCAGACGGCTGCCCGAGGATGCCGAAGACGAACCTAGCGGCTGTCGATGACAGTCGCGAGACAGCGGCGGAACGAATACGGGAAATGCCA
|
|
DNA Sequence for Gene |
>NS47_RS23120
GTGAGCGAGAAAGACGACGACAAGGTGCGCCTGGACAAGTGGCTCTGGGCGGCGCGCTTCTTCAAGACCCGGGCGCTGGCCAAGGCCGCGATAGAGGGCG GCAAGGTGCATTGCCGGGGCGAGCGGTGCAAGCCGAGCAAGGAACCCAGGGTAGGGGAGGAGTTGACCATTCGTACGGGCTTCGACGAGCGAACCGTGAC CATTCGCGCGCTTTCCGTAGTCCGGCGTGGCGCGCCGGAGGCCCAGGCTCTCTACGAGGAAACCGCGGACAGCGTGGCAAGCCGCGAGCGCGCGGCGGCC ATGCGCAAGGCCGGGGCGCTGGGCGTACAGACAGAGGGGCGGCCGAGCAAGAAGCAGCGGCGGCAGATCCACCAGTTGCGCGGCGGCCAGGACTGA
BLASTN Search
|
DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
|
|
DNA Sequence Downstream of Gene |
GAAGCGCCGGTCTCCCGCAGGGGAGACCGGGATGGCCTCAGGCCGAGTCGCGGACCACGCCGAGGCGGCCGATCAGCGGCAATTTCGCCAGCAGGCGGAA CAGCGGTTCGGTCACCTGCACCAGCCAGCCGCTGGCCTTCGCCGCCAGCGGTGTGTAGCAGCCCCAGGCGAGGGCCAGCAGGGCCATCTGCAGGCCGCCG ATGTAGTCGTCCTGGCCCCAGTGCGCGCCGGCTACCAGGCGCGGCATCATGAACAGCACGGCCAGGGTCCAGATCAGCAGGAACTGCCCGGCGCGGCGAG CGAACAGCGACATGAACAGCGCCCAGACCAGCAGCACCGAGGCGTGGTCGCCGGGGAAGCTGCGCTTGGAGCGGTCCTTGATTTCCCACACGCGTTCCCA GTCCGGGAAGTGGTCGCTGAGGTGGATGGCCTTGTCCATCAGCATGGACAGGCTGGCGTGCTGCCAGTGCAGGTGGTGGGCGATCTTCGCGTAGAGCACG
|
|
Amino Acid Sequence |
>RNA-binding protein S4
MSEKDDDKVRLDKWLWAARFFKTRALAKAAIEGGKVHCRGERCKPSKEPRVGEELTIRTGFDERTVTIRALSVVRRGAPEAQALYEETADSVASRERAAA MRKAGALGVQTEGRPSKKQRRQIHQLRGGQD
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
|