Strain | Pseudomonas aeruginosa strain AZPAE14931 AZPAE14931_contig_13, whole genome shotgun sequence. [Details] | |
DNA Sequence Upstream of Gene |
CCTCGCCCAGGTCAACGAGCGGGTTCGCCAGGAGGCCGGCCTGCGTGGCGTCAGCGTGATGGGCAGCACCCTGGTACTGCTCGCCGCGCGCGGCAACCAG GCGAGCTGCCTGTGGGCCGGCGACAGCCGCCTGTACCGCCTGCGCGGCGGCGTGCTGGAAGCCATCTCGCGGGACCACAGCTACGTCCAGGAGCTGCTCG ACAACGCATTGATCAGCGAGGAAGAGGCGCGCCACCATCCGCGCGCCAACGTGGTCACCCGCGCGGTCGGCGTGCACGAGCAACTGGAACTGTCGGAAGC CGCGCTGCACGTGCTGCCCGGCGACAGCTTCCTGCTCTGCAGCGACGGCCTCAACAAGACCGCCGACGACAGCGAACTGCGCGACGTGCTCAGCCACAGC GATCCCTATGCGGTGGTCCGCAGCCTGGTCCACCTGGGCCTGACCCGCGGCGCCCCGGACAACATCACGGCCCTGGTGGTCAGGGCCTTCTGAGACGGAC
|
|
DNA Sequence for Gene |
>NS47_RS18170
ATGGACATAGAACTTCCGGGATTCGACATCGAACGCGAGCTGGGCGAAGGCGCCATGGCCACGGTCTACCTGGCCACCCAGCGCTCGCTGCAGCGCAAGG TGGCGCTGAAGGTGATGGCCGCGGCGCTGGCCGCCGACCCGAGCTTCGCCGAACGCTTCCTGCGCGAAGGTCGGACCCTGGCGCGGCTGTCGCACCCGAA CACGGTGACCATCCACGACATCGGCAACGTCGGCAGTTGCTACTACATGGCCATGGAATACCTGCCCAACGGCACGCTCAAGGAGCGCATCCAGCAGGGC CTCGATCCCGAGCTGGGCCTGGTCTACGTACGGCAGGTGGCCGCCGCGCTCGGCTACGCGCACTCCCAGGGCCTGGTGCATCGAGACGTGAAGCCGGCCA ATATCCTGTTCCGCGCCGACGGCACCGCGGTGCTCTCGGACTTCGGCATCGCCAAGTCGATCGAGGACAATACCCAGTTCACCCAGGTCGGCTTCGCCGT CGGCACCCCCAGCTACATGAGCCCGGAGCAGGCCCGCGGGCAGGAGATCGACGGCCGCGCCGACCTCTACGCGCTGGGCGTGGTGCTCTACGAGATCCTC ACCGGCAAGCTGCCCTACAACGGCAAGGATTCGCTCTCCACCGCCCTGGCCCACCTCACCGAGCCGCTGCCGGAACTGCCGATCGAACAGGGCCGCTACC AGGACATCCTGCGCCAGTTGCTGGCCAAGGACCCGGCCGAGCGCTTCCCAACCGCCGGCGCGCTGATCGCCGCCCTCGACCGCCTGGCGCCGAGCGCCCT GGAAGCCACCCAGATCCGTCCGCTGGCGACGCCGCAGGGCTCGCCGCGAGCGAGCAACCCGCCGCCGGCCGAACCCGCGCCCATGCCGCCCGCCGACCTC GGCGGCCTGCAACCGGTATCGATCCAGTTGCCGCCGGTCACGCCCAGCGCCGGCGGCGCCACGCCGCCCCCGCCTCCGCCATCGCAAGCGGCGAAACCGC CATCGCCCCCGCCGCCTCCGCTGCCACCGGCAAAGCCGCGTGCCGGCGGCAGCCGCACGCCGCTGATCGCCGCCGCCGCGGCCGCGGCCGCCGTGCTCCT GGCGATCGGCGGCGGCGCCTGGTGGCTGCTGGGCTCGGGCGACGCGCCGAGCGCTGCCGATCCAGCGCCGCTGGGACAGACGCCGGCGGACAAGCCGCAG CAGCAGACCCCGGTGGCCGATGCCGAACAGGACGGCGGCGAGCGTCCGCTGCTGATGCCAGGCAAGAAGACCCTGTTCCAGCGCGTCCTGACCAAACCCG GCGCGGCCATCTCCGCCGAGGCTGGCGGCCCGCCCCGGGCCGGCGCGGTGCCGGCCTTCTCGGTGCTCTACGTGTACGCCCGCAAGCAGGTCGGCGGCAG CCCCTGGCTGCGCGTCGGCGCCTCCAGCAACGGCGAGGGCGACGGCTGGCTGCCGGCCAGCGCGGTGAGCGACTGGAAGCAGAGCCTGGTGCTGAAGTTC ACCGAACGCTCCGGCCGCGCGCCGGTGATGTTCCTCAACAGCGCCGAGCAGGTCGAGCGCCTGCTCGGCGATACCCGCGCAGCGCGCGACACCCTGACCC AGGCGGTGGACCACAAGGGCGATCCGCAGGTGGTCGCGGTCGAGCCCAACGACCGGGCGATCCCCCAGGACCAGTTCTACCTGCTGCCGATCTTCGACTC GAAGGAAAGCTTCGACGCCGACGGCCAGCCGGCGCAGTTGCTGGAGGTCGCCTCGATCGACCCCGGCGGCAGCGCCGCGGCACCCCAGGCGCCGGGCCAG GCCGGGCAGGGCGGCGCCAGCGGCGCGGCGAGCGACACCTTCCGCACCGGCATCGTCCTGGTGGTGGACACCTCGGTGTCGATGCAGCCCTACATCGACC GCGTGCGCGAGGTGATCGACGGCCTGCAGCGGCAGATCGGCGAGCGCGGCGACCTGGACAAGGTCAGCTTCGGCCTGGTCGGTTTCCGCAACAACACCGA CAAGACCCCCGGCCTGGAATACGTCAGCAAGACCCTGGTGCCGCTGCAACCGGGCAACGACGCGCAGCGCTTCGCCGAGTTGAGTAGCCAGGTGCGCGCC ACCGACGTCTCCAGCCACTCGTTCAACGAAGACGCCTTCGCCGGGATCATGCAGGCGGTCGACGAAATGGACTGGTCGCCCTACGCCGGGCGCGTGGTGC TGCTGGTCACCGACGCCGGCGCGCTGCGCAAGAACGACCCGCTCGGGCGCACCCAGATGAACGAGGCCGAGGTCCGCCAGGCGGCGCTGCGCAAGGGCGT GAAGATCTATGCCCTGCACCTGCGCACCCCGGCCGGGAAGAACAACCACGGCTACGCCGAGCAGCAGTACCGCAGCCTCACCGCCGACGCCAACCCGAAG ATCGCCGACCTCTACATCCCGGTGGCCGGCGGCGAGGTGAACGCCTTCGGCAACACGGTGAAGGAGATCGGCACGGTGTTCGCCGACCTGGTCCACGACG CCGGCAACCGCAAGCCGCAGGCGCCGCGCTTCGACGCCGCGCCAAGCGTGGCGAGCAAGTCGGCGGCCATCGGCTACGCCATGCAGATGGAATTCCTCGG TCGCCGCGACCCGGTGCGCGCGCCGCAGGTCGTCACCGCCTGGACCGCCGACCGTGACCTGACCAACCCGGCGCTGCCGGCGTTCCAGGTCTGCGTGCTG CTGAGCAAGCTGCAACTCAACGAACTGCAACAGTCGCTGAAACTGATCGTCGACGCGGCCAAGCGTACCCAGACCTCGCCCAAGGACTTCTTCCAGGAAA TCGCCAGCGCCAGCGCCTACATGAGCCGCGACCCGGCGCAACTGGTGAAGGGCAGCAACCTGGCACAGAGCGGCGTGCTCGGCGAATACCTGGAAGGCCT GCCGTACCGCAGCAAGTCGCTGAACATGACCCAGGACCTCTGGCTGTCGCTGAGCGTCGCCGAACAGCAGGACTTCATCGACGAACTGGAGTCGAAGATC CGCCTCTACGAAACCTTCCACAACGACGTCGCCAACTGGGTCCGGTTCGGCGACGCCGACGCCGGCGACGCGCTGTACCGCGTGCCGCTGTCGACGCTGC CATGA
BLASTN Search
|
DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
|
|
DNA Sequence Downstream of Gene |
TCCTGCGCCTGCACGAGGTCGCCCGCAGCCACGGTGCCGGTCGCCAGCGCTACCGCCTGCGGGTGCCGGCGCTGGAATTGCGCGCGGGTCGCCAGCTGGC CATCGTCGGCCCCAGCGGCTGCGGCAAGAGCACCCTGCTCGACCTGCTGGCGCTGGCCCTGGCGCCGGACCCGGGCGGGCGCTTCGAATTCCTCGCCGGG GAACGCCCGCAGGACATCGCCGCGCTCTGGCGCGACGGCCGCCAGGACCGCTTGGCGGCGCTGCGCCGGCAGCACTGCGGCTACGTGCTGCAAAGCGGCG GGTTGCTCGAGTTCCTCGATGTGCGGCGCAACATCGGCCTGCCCTGCGCGTTGCTCGGCGCCCCGTCCGCCGAGCGCGTGCAGGCGCTGGCCGAGCGGCT GGAAATCGGCGACCAGCTGGACAAGAAACCGGCGGCGCTGTCGGTCGGCCAGCGCCAGCGGGTCGCCATCGCCCGCGCCCTGGCGCATGCGCCGCGCCTG
|
|
Amino Acid Sequence |
>serine/threonine protein kinase
MDIELPGFDIERELGEGAMATVYLATQRSLQRKVALKVMAAALAADPSFAERFLREGRTLARLSHPNTVTIHDIGNVGSCYYMAMEYLPNGTLKERIQQG LDPELGLVYVRQVAAALGYAHSQGLVHRDVKPANILFRADGTAVLSDFGIAKSIEDNTQFTQVGFAVGTPSYMSPEQARGQEIDGRADLYALGVVLYEIL TGKLPYNGKDSLSTALAHLTEPLPELPIEQGRYQDILRQLLAKDPAERFPTAGALIAALDRLAPSALEATQIRPLATPQGSPRASNPPPAEPAPMPPADL GGLQPVSIQLPPVTPSAGGATPPPPPPSQAAKPPSPPPPPLPPAKPRAGGSRTPLIAAAAAAAAVLLAIGGGAWWLLGSGDAPSAADPAPLGQTPADKPQ QQTPVADAEQDGGERPLLMPGKKTLFQRVLTKPGAAISAEAGGPPRAGAVPAFSVLYVYARKQVGGSPWLRVGASSNGEGDGWLPASAVSDWKQSLVLKF TERSGRAPVMFLNSAEQVERLLGDTRAARDTLTQAVDHKGDPQVVAVEPNDRAIPQDQFYLLPIFDSKESFDADGQPAQLLEVASIDPGGSAAAPQAPGQ AGQGGASGAASDTFRTGIVLVVDTSVSMQPYIDRVREVIDGLQRQIGERGDLDKVSFGLVGFRNNTDKTPGLEYVSKTLVPLQPGNDAQRFAELSSQVRA TDVSSHSFNEDAFAGIMQAVDEMDWSPYAGRVVLLVTDAGALRKNDPLGRTQMNEAEVRQAALRKGVKIYALHLRTPAGKNNHGYAEQQYRSLTADANPK IADLYIPVAGGEVNAFGNTVKEIGTVFADLVHDAGNRKPQAPRFDAAPSVASKSAAIGYAMQMEFLGRRDPVRAPQVVTAWTADRDLTNPALPAFQVCVL LSKLQLNELQQSLKLIVDAAKRTQTSPKDFFQEIASASAYMSRDPAQLVKGSNLAQSGVLGEYLEGLPYRSKSLNMTQDLWLSLSVAEQQDFIDELESKI RLYETFHNDVANWVRFGDADAGDALYRVPLSTLP
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
|