Strain | Pseudomonas aeruginosa strain AZPAE14931 AZPAE14931_contig_10, whole genome shotgun sequence. [Details] | |
DNA Sequence Upstream of Gene |
GGCGCCAGCCTCGGACTGGCGTTCTGGCTGCTTGGCAGCCTGGGCCTGGGCATCTACGAGCGCGGTACGCGCCTGCCCGAACTGAGCCTGCGCAACGCCG CCGGCGAGTCGGTGCAACTGGCCGATTTCCGGGGCCGCCCGCTGGTGATCAACCTCTGGGCCAGTTGGTGCCCGCCGTGTCGGCGCGAGATGCCGGTGCT GCAACAGGCGCAGGCGGAGAATCCCGACGTAGTGTTCCTCTTCGCCAACCAGGGCGAGAGCGCCGAGACCGTGCGCCATTTCCTCCAGGGCGAGAACCTG CGCCTGGACAACCTGCTGTTCGACAACGGCGGGCAGCTTGGCCAGCAGGTCGGCTCGGTCGCCTTGCCCACCACCGTTTTCTACACCGCCGAGGGCCGCC TGCTGGGCAGCCATCTCGGCGAACTGTCCCGCGGCAGCCTGGCGCGCTACCTCGAAGCCTTCGAGCCGGCCGCTGCCGCCCCCGCAACCAGGAGTTCCGA
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DNA Sequence for Gene |
>NS47_RS16500
ATGAGACTGCCGCGCAACCTGATCACCCTTGGCCTGGGCCTGACCCTCCTCAACGCCGGCCTGGCCACGGCGGCGGAGGAGCTGCCGGCGCCGATCCGCA TGGTCCAGGAGAAGGGCGCCCGCATCCTCGGCAGCTTCGACGCCCCGGATGGCCTGCGCGGCTACGCCGCCGAATACCAGAACCAGGGCATGGCGCTGTA CCTGACGCCCGACGGCAAGCACGTACTCACCGGCCACCTGTTCGACGCCCAGGGCAAGGACCTCAGCCGCGAACCGCTGGAGCGCCTGGTGTATGCGCCG CTGGCCAAGGAAATGTGGCAGAAGATGGAGCAGAGCGCCTGGATCGCCGATGGCCGTGCCGACGCGCCGCGCGTGGTCTACCTGTTCAGCGACCCGAACT GCCCGTACTGCACCATGTTCTGGGAGCAGGCGCGACCCTGGGTGGATGCCGGCAAGGTGCAGTTGCGGCATATCATGGTCGGCATCATCCGCGAGGACAG CGAAGCCAAGTCCGCCGCGCTGCTGGCCAGCAAGGACCCGCAGAAGGCCCTGCACGACCATGAGCAGGCGGGCAAGGCCAGCACCCTGAAGCCGCTGGCG AAGATCCCGGCGGCGGTGCGCAAGCAGCTCGCCGGCAACATGGAACTGATGGAGTCGATGGGCGCCGCGGCGACCCCGGCGATCTTCTATCTCAATGCCG AGGGGCGCATGCAGCAGCAACAGGGCGCGCCGCAGCCGGACCAGTTGGCGGAGATCCTCGGTCCGCGCTGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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DNA Sequence Downstream of Gene |
TCCTCCGGGCCGGCGCCGAGCCGCCGGCCATCTATACTCCCTGCGTTACGCCAACCCAGCGGAGCAAGGGCCATGGACGACGCATTCAGCGAGGAAGGCA GCGCGCAGCCGCGCCATGACGCTCAGCGTCCGGCGCTCGCCCCGCGGAGCGACGGTTTCGACATCCACACCTACCATCCCGACTTCGTCGCCGATCCCTA TCCGCTGTTGCGGCTGATCCGCTCCCGTGCGCCGGTCTGCCGCGACCAGGCCTCGATCTGGTGGATCAGTCGCTATGCCGATGTTTCGGCGTGCCTGCGC GACCGCCGTTTCTCCGCCGACCCCGCTCGCCTTGGCGCCGCCGGCGTCCGCCAGGGCGGCGCCAGCTGGTTCGGCCACCAGCAATTGCAACCGCTGGCGC GCTTCTACGACAACTTCATGCTGTTCAACGACGCGCCGCGGCACACCCGCCTGCGCAGGCTGTTCGCTCCGGCCTTCGGCCCCGACGCCGTGCGCCGCTG
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Amino Acid Sequence |
>dihydroneopterin aldolase
MRLPRNLITLGLGLTLLNAGLATAAEELPAPIRMVQEKGARILGSFDAPDGLRGYAAEYQNQGMALYLTPDGKHVLTGHLFDAQGKDLSREPLERLVYAP LAKEMWQKMEQSAWIADGRADAPRVVYLFSDPNCPYCTMFWEQARPWVDAGKVQLRHIMVGIIREDSEAKSAALLASKDPQKALHDHEQAGKASTLKPLA KIPAAVRKQLAGNMELMESMGAAATPAIFYLNAEGRMQQQQGAPQPDQLAEILGPR
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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